| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is exeJ [H]
Identifier: 218550229
GI number: 218550229
Start: 2989141
End: 2989746
Strand: Direct
Name: exeJ [H]
Synonym: EFER_2921
Alternate gene names: 218550229
Gene position: 2989141-2989746 (Clockwise)
Preceding gene: 218550228
Following gene: 218550230
Centisome position: 65.14
GC content: 55.78
Gene sequence:
>606_bases GTGAAAAGGACTCGCGCTGGTTTCACGTTACTGGAAATGCTGGTGGCGATAGCCATTTTTGCCTCACTGGCACTGATGGC ACAGCAGGTGACAAACGGCGTCACACGCGTGAATAGCGCCATCGCCGGACACGATCAAAAACTGAACCTCATGCAGCAAA CGATGAGTTTTCTGACCCACGATCTGACACAAATGATGCCGCGTCCGGTAAGAGGCGATCAGGGTCAGCGAGAACCTGCG TTACTGGCGGGCGCTGGCGTGCTGGCCTCTGAGAGTGAAGGAATACGCTTTGTGCGCGGCGGTGTGGTTAATCCATTGAT GCGTCTGCCGCGCAGTAATCTGCTCACCGTCGGTTACCGCATTCATGACGGTTATCTCGAACGGTTAGCCTGGCCGCTGA CCGATGCCGCAGGCAGCGTGAAGCCAACAACGCAAAAGTTGATTCCGGCGGATTCACTTCGTTTGCAGTTTTACGACGGC ACTCGCTGGCAGGAAACCTGGTCATCAGTGAAGGCGATCCCTGTGGCAGTGCGCATGACTCTGCATTCGCCGCAATGGGG CGAGATTGAACGCATCTGGTTGTTACGCGGGCCGCAATTATCATGA
Upstream 100 bases:
>100_bases CGCTGCTCCAGGCGGTGGATATTGAAGTCAGTCTTCATGAAGACTTTTCGTCAGTGATTCAGTCACGACGCGCCTGGTTT AGCGCCGTGGGAGGCCAACA
Downstream 100 bases:
>100_bases TCACCTCACCACCAAAACGCGGAATGGCACTGGTCGTGGTGCTGGTATTGCTGGCGGTCATGATGCTGGTAACCATCACG CTTTCCGGGCGGATGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAIAGHDQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPA LLAGAGVLASESEGIRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTTQKLIPADSLRLQFYDG TRWQETWSSVKAIPVAVRMTLHSPQWGEIERIWLLRGPQLS
Sequences:
>Translated_201_residues MKRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAIAGHDQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPA LLAGAGVLASESEGIRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTTQKLIPADSLRLQFYDG TRWQETWSSVKAIPVAVRMTLHSPQWGEIERIWLLRGPQLS >Mature_201_residues MKRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAIAGHDQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPA LLAGAGVLASESEGIRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTTQKLIPADSLRLQFYDG TRWQETWSSVKAIPVAVRMTLHSPQWGEIERIWLLRGPQLS
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes [H]
COG id: COG4795
COG function: function code U; Type II secretory pathway, component PulJ
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP J family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010055 - InterPro: IPR012902 - InterPro: IPR001120 [H]
Pfam domain/function: PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 22344; Mature: 22344
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAIAGHDQKLNLMQQTMSFLTH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DLTQMMPRPVRGDQGQREPALLAGAGVLASESEGIRFVRGGVVNPLMRLPRSNLLTVGYR HHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCHHHHHHHCCCCCEEEEEEE IHDGYLERLAWPLTDAAGSVKPTTQKLIPADSLRLQFYDGTRWQETWSSVKAIPVAVRMT EHHHHHHHHHHCHHCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEEEEEE LHSPQWGEIERIWLLRGPQLS ECCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MKRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAIAGHDQKLNLMQQTMSFLTH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DLTQMMPRPVRGDQGQREPALLAGAGVLASESEGIRFVRGGVVNPLMRLPRSNLLTVGYR HHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEECCCHHHHHHHCCCCCEEEEEEE IHDGYLERLAWPLTDAAGSVKPTTQKLIPADSLRLQFYDGTRWQETWSSVKAIPVAVRMT EHHHHHHHHHHCHHCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEEEEEE LHSPQWGEIERIWLLRGPQLS ECCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]