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The map label for this gene is yjcF [C]

Identifier: 218550102

GI number: 218550102

Start: 2858916

End: 2859818

Strand: Reverse

Name: yjcF [C]

Synonym: EFER_2788

Alternate gene names: 218550102

Gene position: 2859818-2858916 (Counterclockwise)

Preceding gene: 218550103

Following gene: 218550100

Centisome position: 62.32

GC content: 52.38

Gene sequence:

>903_bases
ATGATGTCACTGACACTGAATGTTAATCATGGACAACAGATTTCAGCCTGCACGCTGAATGATTCAAGAGTGAAACGGAT
GATGTCCGGGAACCATGACACCGCCGTGCATATGGGGTTGTGGGACAGATTTAAGGACTGGTTCCGCATAGAAAAGAAAG
CAGAGGCTCTCGAAAATCTCTATAAATTGCTTTATCCGACCCCTGAAGATACCGAAGTCAGTGGGCTCCCTGGCGCTGTT
GATAATAACGAAGGCAAGAAGTATACGTCTTCTCTTTATGCATTCCGTAAGCTCAAAGCATTGATCTCCGATCAGTCAGT
GAGTAAGTCTGTAAACTGGACAATCAGTCTTGACGTGAATAACTGCCTGAAGACAACCTTTCATTTCGGGAATGTGGTCA
TTGAACACCAGGCAATACAATTAAGCTCTACTGGGGAACGACCTGATCTGAGAGGTGCAGACCTGAGAGGTGCCAACCTT
AGTGGGGCCAGCCTGTTGGGTGCCTGCCTGTACGGTGCCGACCTGCGCGATGCCAACTTGCACGGTGCTGACCTGCGTGG
TGCCGACCTGCACGGTGCCAACCTTATCCGTGCCAACCTTAATGGTGCCAACCTTAGCGGTGCCGACTTGTGTGGTGCCA
GCCTTAGCGGTGCCAGCCTTAGCGGTGCCAGCCTGCGCGGTACCAACCTAAGTTTTGCCAGACTGCACGGTGCTGATCTG
CGCGATGCCAGCCTGTACAGTACCGACCTGCGCAGTGCTGACTTGTGCGATGCAGACCTGCGTAGTGCCGACCTGAGTTT
TGCCGACCTGCATAATGCCAGACTGCATGGTGCCAACCTGCGCAATACCAACATGCACTGTGTCAGGCTGTACGGTGCCG
ACCTGAGTTTTGCCATAGTGTAA

Upstream 100 bases:

>100_bases
TACAGAAAGATATGGGAATTGATATGCCTTACGGCAGAGCATTCCGGGTATACCGTAAACCAGCTCGTTTCAGACCACAG
GTGATAACATCAGGAGGCAA

Downstream 100 bases:

>100_bases
GGTGCTGAACTGCACAGTGTCAGGATGTACAGAGTTATAACAGAAGGCGCGGCTGGTCTGGGTTCGGTATTGCGCCTTAC
GATCCCAGCTTAACGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MMSLTLNVNHGQQISACTLNDSRVKRMMSGNHDTAVHMGLWDRFKDWFRIEKKAEALENLYKLLYPTPEDTEVSGLPGAV
DNNEGKKYTSSLYAFRKLKALISDQSVSKSVNWTISLDVNNCLKTTFHFGNVVIEHQAIQLSSTGERPDLRGADLRGANL
SGASLLGACLYGADLRDANLHGADLRGADLHGANLIRANLNGANLSGADLCGASLSGASLSGASLRGTNLSFARLHGADL
RDASLYSTDLRSADLCDADLRSADLSFADLHNARLHGANLRNTNMHCVRLYGADLSFAIV

Sequences:

>Translated_300_residues
MMSLTLNVNHGQQISACTLNDSRVKRMMSGNHDTAVHMGLWDRFKDWFRIEKKAEALENLYKLLYPTPEDTEVSGLPGAV
DNNEGKKYTSSLYAFRKLKALISDQSVSKSVNWTISLDVNNCLKTTFHFGNVVIEHQAIQLSSTGERPDLRGADLRGANL
SGASLLGACLYGADLRDANLHGADLRGADLHGANLIRANLNGANLSGADLCGASLSGASLSGASLRGTNLSFARLHGADL
RDASLYSTDLRSADLCDADLRSADLSFADLHNARLHGANLRNTNMHCVRLYGADLSFAIV
>Mature_300_residues
MMSLTLNVNHGQQISACTLNDSRVKRMMSGNHDTAVHMGLWDRFKDWFRIEKKAEALENLYKLLYPTPEDTEVSGLPGAV
DNNEGKKYTSSLYAFRKLKALISDQSVSKSVNWTISLDVNNCLKTTFHFGNVVIEHQAIQLSSTGERPDLRGADLRGANL
SGASLLGACLYGADLRDANLHGADLRGADLHGANLIRANLNGANLSGADLCGASLSGASLSGASLRGTNLSFARLHGADL
RDASLYSTDLRSADLCDADLRSADLSFADLHNARLHGANLRNTNMHCVRLYGADLSFAIV

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=140, Percent_Identity=36.4285714285714, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221377802, Length=162, Percent_Identity=35.1851851851852, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 32393; Mature: 32393

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSLTLNVNHGQQISACTLNDSRVKRMMSGNHDTAVHMGLWDRFKDWFRIEKKAEALENL
CEEEEEECCCCCEEEEEECCHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
YKLLYPTPEDTEVSGLPGAVDNNEGKKYTSSLYAFRKLKALISDQSVSKSVNWTISLDVN
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
NCLKTTFHFGNVVIEHQAIQLSSTGERPDLRGADLRGANLSGASLLGACLYGADLRDANL
HHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
HGADLRGADLHGANLIRANLNGANLSGADLCGASLSGASLSGASLRGTNLSFARLHGADL
CCCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCEECCCCCEEEEECCCCC
RDASLYSTDLRSADLCDADLRSADLSFADLHNARLHGANLRNTNMHCVRLYGADLSFAIV
CCCCEECCCCCCCCCCCCHHHHCCCCHHHHCCCEECCCCCCCCCEEEEEEECCCEEEEEC
>Mature Secondary Structure
MMSLTLNVNHGQQISACTLNDSRVKRMMSGNHDTAVHMGLWDRFKDWFRIEKKAEALENL
CEEEEEECCCCCEEEEEECCHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
YKLLYPTPEDTEVSGLPGAVDNNEGKKYTSSLYAFRKLKALISDQSVSKSVNWTISLDVN
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
NCLKTTFHFGNVVIEHQAIQLSSTGERPDLRGADLRGANLSGASLLGACLYGADLRDANL
HHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
HGADLRGADLHGANLIRANLNGANLSGADLCGASLSGASLSGASLRGTNLSFARLHGADL
CCCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCEECCCCCEEEEECCCCC
RDASLYSTDLRSADLCDADLRSADLSFADLHNARLHGANLRNTNMHCVRLYGADLSFAIV
CCCCEECCCCCCCCCCCCHHHHCCCCHHHHCCCEECCCCCCCCCEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]