| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218550100
Identifier: 218550100
GI number: 218550100
Start: 2856796
End: 2858532
Strand: Reverse
Name: 218550100
Synonym: EFER_2786
Alternate gene names: NA
Gene position: 2858532-2856796 (Counterclockwise)
Preceding gene: 218550102
Following gene: 218550090
Centisome position: 62.29
GC content: 49.51
Gene sequence:
>1737_bases ATGAGTAATCTGTCACTTCAACCCTATCAGCAAGCTCCTGGTTGGAATACCCTGGAGCGCCTTAATAAACAGGAATCTTC TGTGCCGTTACAGGGCCAGGCAGTAGGTGAATTTGTAAAAACATTGCTCAAACAGGATGTTAAATTGAGTTTGCTTGAGC GGTTTCTTGATTTTTTCCAGGGAGGACGTAGGCGGGAAATCCAGGAGGCTCCTGTTTTACTCAAAGCGACAAGTATGTTG AAAAACGCATCTGATGCCGAAAAGAAGGTGGCTCTTGAAACATTCCAGATGCAGGGCGTGCATGTGGCAAAGGGACGCAC TTCTCTTGCAGAGGCAGCCGGAGCGGCCCTGGATTTGTTGCAGAAAAATGACTGCGGCGGGTTCAGCCAAACTCTGCGGA TAGAGGCCAGGGACAATGGTTTACAACAGGTGACTGTTGATCCAGGGGTGCCTTATCTCGGAGGATGTTCTTTTGAAGCG GTGACGGGAATTACATCAACGGAATATCTTTCTGGCGTGCGAAAAATGCCGCTGAACCTCTACGCCGGAAAAATTCCTAC CCATGACCCGGTCAACTTTCCCTCCAGCCTGCCCGAAGTGGCATTGGGAGATCTCCACGGAAATGCACTGTTAATGCTTC ACCAATCTATTACCACCGGACATCTGAAGGTGAAGGACGAAGGTGCATTTACCAAATTGCAGCAGGCCTACCACTCTGGT GATAGCGCGACATTCAACAAGTTACTGCCGGATGCGGTGAAAGCGGGAGCGGCCCAGGGGCGCATGATTATGGTGGGCGA TGTGCTTGCCGACCGGGGATTGAGTGACTTTTGTTCATTAAATGTGCTGGCGCAAATGGATAAACTCGGTGTGAAATATG ATGTTTTGCTGGGTAACCATGACCTTGCTGCCTTTGGGCAGTGCCAGTCCCTCGTACCGGCGTATACCCCGGATGCTAAC CCGACACCTGCTGCACCGTCGCCCGCGATTACCTGGGCATCAGAATCGATGAGGGGACCCGCTGTGGCATCTTTACCCCG CTTTGATTCTCCTGATTATGCTGCAAGCGTAAGTAAAGATGGCTTTAAGAGCGTCGGGGAGGCAAAAGAGGCATACACCA AACTGATGAATAAAGCTTACATTCCGCATCTGCATCTGCTGCAACCTGCCAGCGTCGGAGCGTTCTGTTACAGCCATGCA CCTCTGACGGGGGATGCATGTAAAACTCTGGTGCCGCTGATGGAGAAGGAGCTTGAATCGCAGAGACGTCCTGTACCACA AAAATCAGATGAAATGACCTCCACGAATCTGGCTCATATGGACAAGCTATTCCTGAATCTGATGTTTAAGGATGATGGCG TGACGATGATAAACGATAACTGGAATAAACTGTTCGCGGCTGCCGTGGATGGGGTTAAGTATTCCTCAATCAAAGGTTTG CCAAAACCTAAAGAGGATGTCTGGCTCTTTTTAGGCCAGATGGTATATCGTCAGGCGAATCTGGCGGATATTGGTTTGAC GAAAGAAGTGAAAAATGAAAACGGTGAAATGGTGAAAGAAGTACTGGACACACCTGACGGGATGATCTCGGTGCATGGGC ATACCAGCGCAATTGGCAAGGAGAGTTATGTCACGCTTGATGGGATGGGCGGTAAAATTGGGTCCGATCTGATATTTGAT CGTAATGTCCATGTGGCAACTACGTTGAGTGGACAGAATAATTCGTTTCATCCGTAA
Upstream 100 bases:
>100_bases TGGAATTTTGTTATCCAACAATAAGAATGAGCTATTTTTTATAGCCTTTATGCCGTGAGCTATCTGAAAGTGGGTAACTT ACAACAGCAAGGAGGTTCCA
Downstream 100 bases:
>100_bases CAAGTCCAGGACTTCCGACATTTTGCAATGCCGGGAGTCCCGCTTCCAGAACTCTGCAAAACTAAGATCCTGCGTATCGC CAGACGAATTTGAGTTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MSNLSLQPYQQAPGWNTLERLNKQESSVPLQGQAVGEFVKTLLKQDVKLSLLERFLDFFQGGRRREIQEAPVLLKATSML KNASDAEKKVALETFQMQGVHVAKGRTSLAEAAGAALDLLQKNDCGGFSQTLRIEARDNGLQQVTVDPGVPYLGGCSFEA VTGITSTEYLSGVRKMPLNLYAGKIPTHDPVNFPSSLPEVALGDLHGNALLMLHQSITTGHLKVKDEGAFTKLQQAYHSG DSATFNKLLPDAVKAGAAQGRMIMVGDVLADRGLSDFCSLNVLAQMDKLGVKYDVLLGNHDLAAFGQCQSLVPAYTPDAN PTPAAPSPAITWASESMRGPAVASLPRFDSPDYAASVSKDGFKSVGEAKEAYTKLMNKAYIPHLHLLQPASVGAFCYSHA PLTGDACKTLVPLMEKELESQRRPVPQKSDEMTSTNLAHMDKLFLNLMFKDDGVTMINDNWNKLFAAAVDGVKYSSIKGL PKPKEDVWLFLGQMVYRQANLADIGLTKEVKNENGEMVKEVLDTPDGMISVHGHTSAIGKESYVTLDGMGGKIGSDLIFD RNVHVATTLSGQNNSFHP
Sequences:
>Translated_578_residues MSNLSLQPYQQAPGWNTLERLNKQESSVPLQGQAVGEFVKTLLKQDVKLSLLERFLDFFQGGRRREIQEAPVLLKATSML KNASDAEKKVALETFQMQGVHVAKGRTSLAEAAGAALDLLQKNDCGGFSQTLRIEARDNGLQQVTVDPGVPYLGGCSFEA VTGITSTEYLSGVRKMPLNLYAGKIPTHDPVNFPSSLPEVALGDLHGNALLMLHQSITTGHLKVKDEGAFTKLQQAYHSG DSATFNKLLPDAVKAGAAQGRMIMVGDVLADRGLSDFCSLNVLAQMDKLGVKYDVLLGNHDLAAFGQCQSLVPAYTPDAN PTPAAPSPAITWASESMRGPAVASLPRFDSPDYAASVSKDGFKSVGEAKEAYTKLMNKAYIPHLHLLQPASVGAFCYSHA PLTGDACKTLVPLMEKELESQRRPVPQKSDEMTSTNLAHMDKLFLNLMFKDDGVTMINDNWNKLFAAAVDGVKYSSIKGL PKPKEDVWLFLGQMVYRQANLADIGLTKEVKNENGEMVKEVLDTPDGMISVHGHTSAIGKESYVTLDGMGGKIGSDLIFD RNVHVATTLSGQNNSFHP >Mature_577_residues SNLSLQPYQQAPGWNTLERLNKQESSVPLQGQAVGEFVKTLLKQDVKLSLLERFLDFFQGGRRREIQEAPVLLKATSMLK NASDAEKKVALETFQMQGVHVAKGRTSLAEAAGAALDLLQKNDCGGFSQTLRIEARDNGLQQVTVDPGVPYLGGCSFEAV TGITSTEYLSGVRKMPLNLYAGKIPTHDPVNFPSSLPEVALGDLHGNALLMLHQSITTGHLKVKDEGAFTKLQQAYHSGD SATFNKLLPDAVKAGAAQGRMIMVGDVLADRGLSDFCSLNVLAQMDKLGVKYDVLLGNHDLAAFGQCQSLVPAYTPDANP TPAAPSPAITWASESMRGPAVASLPRFDSPDYAASVSKDGFKSVGEAKEAYTKLMNKAYIPHLHLLQPASVGAFCYSHAP LTGDACKTLVPLMEKELESQRRPVPQKSDEMTSTNLAHMDKLFLNLMFKDDGVTMINDNWNKLFAAAVDGVKYSSIKGLP KPKEDVWLFLGQMVYRQANLADIGLTKEVKNENGEMVKEVLDTPDGMISVHGHTSAIGKESYVTLDGMGGKIGSDLIFDR NVHVATTLSGQNNSFHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62565; Mature: 62434
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLSLQPYQQAPGWNTLERLNKQESSVPLQGQAVGEFVKTLLKQDVKLSLLERFLDFFQ CCCCCCCCHHCCCCCHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHC GGRRREIQEAPVLLKATSMLKNASDAEKKVALETFQMQGVHVAKGRTSLAEAAGAALDLL CCCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHH QKNDCGGFSQTLRIEARDNGLQQVTVDPGVPYLGGCSFEAVTGITSTEYLSGVRKMPLNL HCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCE YAGKIPTHDPVNFPSSLPEVALGDLHGNALLMLHQSITTGHLKVKDEGAFTKLQQAYHSG EECCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHCC DSATFNKLLPDAVKAGAAQGRMIMVGDVLADRGLSDFCSLNVLAQMDKLGVKYDVLLGNH CCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCC DLAAFGQCQSLVPAYTPDANPTPAAPSPAITWASESMRGPAVASLPRFDSPDYAASVSKD CHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCHHHHCCCH GFKSVGEAKEAYTKLMNKAYIPHLHLLQPASVGAFCYSHAPLTGDACKTLVPLMEKELES HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH QRRPVPQKSDEMTSTNLAHMDKLFLNLMFKDDGVTMINDNWNKLFAAAVDGVKYSSIKGL HHCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEECCCHHHHHHHHHCCCEEHHCCCC PKPKEDVWLFLGQMVYRQANLADIGLTKEVKNENGEMVKEVLDTPDGMISVHGHTSAIGK CCCHHHHHHHHHHHHHHHCCCHHCCCHHHHHCCCHHHHHHHHCCCCCEEEECCCCCCCCC ESYVTLDGMGGKIGSDLIFDRNVHVATTLSGQNNSFHP CCEEEEECCCCCCCCCEEEECCEEEEEEECCCCCCCCC >Mature Secondary Structure SNLSLQPYQQAPGWNTLERLNKQESSVPLQGQAVGEFVKTLLKQDVKLSLLERFLDFFQ CCCCCCCHHCCCCCHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHC GGRRREIQEAPVLLKATSMLKNASDAEKKVALETFQMQGVHVAKGRTSLAEAAGAALDLL CCCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHH QKNDCGGFSQTLRIEARDNGLQQVTVDPGVPYLGGCSFEAVTGITSTEYLSGVRKMPLNL HCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCE YAGKIPTHDPVNFPSSLPEVALGDLHGNALLMLHQSITTGHLKVKDEGAFTKLQQAYHSG EECCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHCC DSATFNKLLPDAVKAGAAQGRMIMVGDVLADRGLSDFCSLNVLAQMDKLGVKYDVLLGNH CCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCC DLAAFGQCQSLVPAYTPDANPTPAAPSPAITWASESMRGPAVASLPRFDSPDYAASVSKD CHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCHHHHCCCH GFKSVGEAKEAYTKLMNKAYIPHLHLLQPASVGAFCYSHAPLTGDACKTLVPLMEKELES HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH QRRPVPQKSDEMTSTNLAHMDKLFLNLMFKDDGVTMINDNWNKLFAAAVDGVKYSSIKGL HHCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEECCCHHHHHHHHHCCCEEHHCCCC PKPKEDVWLFLGQMVYRQANLADIGLTKEVKNENGEMVKEVLDTPDGMISVHGHTSAIGK CCCHHHHHHHHHHHHHHHCCCHHCCCHHHHHCCCHHHHHHHHCCCCCEEEECCCCCCCCC ESYVTLDGMGGKIGSDLIFDRNVHVATTLSGQNNSFHP CCEEEEECCCCCCCCCEEEECCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA