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The map label for this gene is ybgK [H]

Identifier: 218549728

GI number: 218549728

Start: 2465193

End: 2466125

Strand: Reverse

Name: ybgK [H]

Synonym: EFER_2405

Alternate gene names: 218549728

Gene position: 2466125-2465193 (Counterclockwise)

Preceding gene: 218549729

Following gene: 218549727

Centisome position: 53.74

GC content: 53.38

Gene sequence:

>933_bases
ATGCTGAAAATCATTCGCGCGGGAATGTACACCACTGTTCAGGATGGCGGTCGTCATGGTTTTCGTCAGTCTGGGATCAG
TCACTGTGGCGCACTGGATTTGCCTGCATTACGTATAGCGAATCTGTTGGTAGGTAATGCTGCCGATGCGCCAGCACTGG
AAATCACCCTCGGGCAGTTAACGGTTGAATTTGAAAGTGACGGCTGGTTTGCCCTGACGGGAGCTGGTTGTGAGGCGCGG
CTGGATGACAATGCTGTCTGGACAGGCTGGCGCTTACCCGTGAAGGCCGGTCAGCGTTTAACACTTAAGCGCCCATTGCA
TGGGATGCGCAGCTATCTGGCTGTCGCGGGAGGCATTGATGTTCCTGCGGTAATGGGATCATGCAGTACTGATCTGAAAG
TGGGGATTGGTGGTCTCGAAGGGCGGTTACTGAAAGATGGCGACAGACTTCCCATTGGCAAAGCAACGCGTGCGTTTATG
GAAGCACAAGGGGTAAAACAGCTACTGTGGGGCAACCGTATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTTGATCG
CGCTTCACAAGAGGCATTCTGGCGTTCACCGTGGCAGTTGAGCCCGCAAAGTAACCGCATGGGATATCGCCTTCAGGGGC
AAGTGTTAAAACGCACGACTCAGCGTGAAATGCTTTCTCATGGTCTGCTACCTGGTGTGATACAGGTGCCGCATAACGGT
CAGCCAATCGTATTGATGAACGATGCCCAAACTACCGGTGGATATCCGCGAATTGCCTGCATTATCGAGGCTGACATGTA
CCATCTGGCGCAAATCCCGCTTGGACAGCCAATCCACTTTGTGCAGTGCTCGTTGGAGGAGGCGCTAAAAGCGCGTCACG
ATCAGCAGCGCTACTTCGAACAATTAGCATGGCGGTTACACAATGAAAATTGA

Upstream 100 bases:

>100_bases
TTGGTCATACATCGTTGAAATTGTTTGATCCCACACGGGATGAGCCCATCTTGTTGCGCCCAGGAGATAGCGTGCGCTTT
GTACCGCAGAAGGAGGGAGT

Downstream 100 bases:

>100_bases
TCTTAACGCAGACCTGGGTGAAGGCTGCGCCAGTGATGCAGAGCTTCTTACGCTGGTGTCATCTGCCAATATTGCCTGTG
GATTTCACGCCGGAGATGCG

Product: hydrolase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDLPALRIANLLVGNAADAPALEITLGQLTVEFESDGWFALTGAGCEAR
LDDNAVWTGWRLPVKAGQRLTLKRPLHGMRSYLAVAGGIDVPAVMGSCSTDLKVGIGGLEGRLLKDGDRLPIGKATRAFM
EAQGVKQLLWGNRIRALPGPEYHEFDRASQEAFWRSPWQLSPQSNRMGYRLQGQVLKRTTQREMLSHGLLPGVIQVPHNG
QPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALKARHDQQRYFEQLAWRLHNEN

Sequences:

>Translated_310_residues
MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDLPALRIANLLVGNAADAPALEITLGQLTVEFESDGWFALTGAGCEAR
LDDNAVWTGWRLPVKAGQRLTLKRPLHGMRSYLAVAGGIDVPAVMGSCSTDLKVGIGGLEGRLLKDGDRLPIGKATRAFM
EAQGVKQLLWGNRIRALPGPEYHEFDRASQEAFWRSPWQLSPQSNRMGYRLQGQVLKRTTQREMLSHGLLPGVIQVPHNG
QPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALKARHDQQRYFEQLAWRLHNEN
>Mature_310_residues
MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDLPALRIANLLVGNAADAPALEITLGQLTVEFESDGWFALTGAGCEAR
LDDNAVWTGWRLPVKAGQRLTLKRPLHGMRSYLAVAGGIDVPAVMGSCSTDLKVGIGGLEGRLLKDGDRLPIGKATRAFM
EAQGVKQLLWGNRIRALPGPEYHEFDRASQEAFWRSPWQLSPQSNRMGYRLQGQVLKRTTQREMLSHGLLPGVIQVPHNG
QPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALKARHDQQRYFEQLAWRLHNEN

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=310, Percent_Identity=94.1935483870968, Blast_Score=607, Evalue=1e-175,
Organism=Saccharomyces cerevisiae, GI6319685, Length=317, Percent_Identity=30.2839116719243, Blast_Score=122, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 34276; Mature: 34276

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDLPALRIANLLVGNAADAPALEITLGQL
CCEEEECCCEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEE
TVEFESDGWFALTGAGCEARLDDNAVWTGWRLPVKAGQRLTLKRPLHGMRSYLAVAGGID
EEEECCCCEEEEECCCCEEEECCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCC
VPAVMGSCSTDLKVGIGGLEGRLLKDGDRLPIGKATRAFMEAQGVKQLLWGNRIRALPGP
HHHHHCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCC
EYHEFDRASQEAFWRSPWQLSPQSNRMGYRLQGQVLKRTTQREMLSHGLLPGVIQVPHNG
CHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEECCCCC
QPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALKARHDQQRYFE
CCEEEECCCCCCCCCCEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QLAWRLHNEN
HHHHHHCCCC
>Mature Secondary Structure
MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDLPALRIANLLVGNAADAPALEITLGQL
CCEEEECCCEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEE
TVEFESDGWFALTGAGCEARLDDNAVWTGWRLPVKAGQRLTLKRPLHGMRSYLAVAGGID
EEEECCCCEEEEECCCCEEEECCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCC
VPAVMGSCSTDLKVGIGGLEGRLLKDGDRLPIGKATRAFMEAQGVKQLLWGNRIRALPGP
HHHHHCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCC
EYHEFDRASQEAFWRSPWQLSPQSNRMGYRLQGQVLKRTTQREMLSHGLLPGVIQVPHNG
CHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEECCCCC
QPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALKARHDQQRYFE
CCEEEECCCCCCCCCCEEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QLAWRLHNEN
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]