| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549701
Identifier: 218549701
GI number: 218549701
Start: 2436371
End: 2437612
Strand: Direct
Name: 218549701
Synonym: EFER_2378
Alternate gene names: NA
Gene position: 2436371-2437612 (Clockwise)
Preceding gene: 218549700
Following gene: 218549702
Centisome position: 53.09
GC content: 48.39
Gene sequence:
>1242_bases ATGAAAATTAAACAGGCCATCTTCACCGCCGGGTACTCTTCATTCTATTTTGACGATCAGCAAGCCATTAAAAATGGCGC AGGACACGATGGGTTTATTTACACTGGCGCGCCGGTAACACCAGGCTTTACTGCCGTGCGTCAGGCGGGTGAATGTGTAT CAGTGCAATTGATTCTGGAAAATGGTGCCATTGCGATGGGCGACTGCACTGCCGTTCAGTATTCAGGTGCAGGTGGGCGT GATCCTTTATTCCTTGCCGCGAATTTTATTCCCTTTCTCAATGATTACATCAAACCTCTGCTTGAAGGCCGTGACGTTAA TACCTTCCTCGAAAATGCCCGTTTCTTTGATACGTTGCGTATCGAGGGAAAATTGCTCCATACCGCCGTACGTTATGGAC TTTCCCAGGCATTGCTTGACGCCACCGCGCTCGCAACAAAACGCTTAAAGGCCGAAGTGGTGTGTGACGAATGGCACTTA CCATGCGTGCCAGAACCTATTCCGTTGTTTGGACAAAGTGGGGATGATCGTTATCTCGCCGTCGATAAGATGATCCTCAA AGGCGTGGATGTGCTGCCACATGCTTTGATCAATAACGTTGAAGAAAAACTTGGTCAAAAAGGGGAAAAACTGCGTACAT ACGTACGCTGGCTATCAGATCGCATTTTGCAATTACGTCAATCATCAGATTACCGACCAACACTGCACATTGATGTTTAC GGCACCATCGGCCTGATTTTTGCGATGGAACCGAAACGCTGTGCAGAATATATCGCCAGCCTGGAACAAGAAGCCCAGGG ACTGCCGCTCTATATCGAAGGCCCGGTCGATGCTGGTAATAAAGCAGATCAAATCCAGGCTCTTGCCGCCATCACCAACG AACTGGCTCGTCTCGGTTCTGGCGTAAAAATTGTCGCCGACGAGTGGTGTAACACCTTCCAGGATATTGTTGATTTTACC GACGCTAAAAGCTGCCATATGGTGCAAATCAAAACACCGGATCTGGGCAGTATCCATAACATTGTCGATGCCGTGCTTTA TTGCAATAAGCATGGCATGGAGGCTTATCAGGGAGGCACCTGCAACGAAACGGATATTAGCGCCCGCACTTGTGTTCATG TAGCGCTGGCAGCCCGTCCAATGCGCATGCTGATTAAACCAGGAATGGGCTTTGACGAAGGTCTTAATATCGTCTTCAAC GAAATGAATCGTACCATTGCGCTATTGCAGACTAAGGATTAA
Upstream 100 bases:
>100_bases AGCAGAACGCGCCCGTGCAGAAGGACGCGGCCCATCATTCCAGATGGTTATTGATGACATTAACGCCGTATCCCACAGTC AATTAATAGGAAGACCATAA
Downstream 100 bases:
>100_bases CCAATGGCTCATACATTTAAGATCTTATCGCCAACGGCTATCCTCGGTTATGGCTTCCCCGAAGAAAGTTTTCGCAAAGC GATGGCGGAGTCACCGGATT
Product: methylaspartate ammonia-lyase
Products: NA
Alternate protein names: Beta-methylaspartase [H]
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MKIKQAIFTAGYSSFYFDDQQAIKNGAGHDGFIYTGAPVTPGFTAVRQAGECVSVQLILENGAIAMGDCTAVQYSGAGGR DPLFLAANFIPFLNDYIKPLLEGRDVNTFLENARFFDTLRIEGKLLHTAVRYGLSQALLDATALATKRLKAEVVCDEWHL PCVPEPIPLFGQSGDDRYLAVDKMILKGVDVLPHALINNVEEKLGQKGEKLRTYVRWLSDRILQLRQSSDYRPTLHIDVY GTIGLIFAMEPKRCAEYIASLEQEAQGLPLYIEGPVDAGNKADQIQALAAITNELARLGSGVKIVADEWCNTFQDIVDFT DAKSCHMVQIKTPDLGSIHNIVDAVLYCNKHGMEAYQGGTCNETDISARTCVHVALAARPMRMLIKPGMGFDEGLNIVFN EMNRTIALLQTKD
Sequences:
>Translated_413_residues MKIKQAIFTAGYSSFYFDDQQAIKNGAGHDGFIYTGAPVTPGFTAVRQAGECVSVQLILENGAIAMGDCTAVQYSGAGGR DPLFLAANFIPFLNDYIKPLLEGRDVNTFLENARFFDTLRIEGKLLHTAVRYGLSQALLDATALATKRLKAEVVCDEWHL PCVPEPIPLFGQSGDDRYLAVDKMILKGVDVLPHALINNVEEKLGQKGEKLRTYVRWLSDRILQLRQSSDYRPTLHIDVY GTIGLIFAMEPKRCAEYIASLEQEAQGLPLYIEGPVDAGNKADQIQALAAITNELARLGSGVKIVADEWCNTFQDIVDFT DAKSCHMVQIKTPDLGSIHNIVDAVLYCNKHGMEAYQGGTCNETDISARTCVHVALAARPMRMLIKPGMGFDEGLNIVFN EMNRTIALLQTKD >Mature_413_residues MKIKQAIFTAGYSSFYFDDQQAIKNGAGHDGFIYTGAPVTPGFTAVRQAGECVSVQLILENGAIAMGDCTAVQYSGAGGR DPLFLAANFIPFLNDYIKPLLEGRDVNTFLENARFFDTLRIEGKLLHTAVRYGLSQALLDATALATKRLKAEVVCDEWHL PCVPEPIPLFGQSGDDRYLAVDKMILKGVDVLPHALINNVEEKLGQKGEKLRTYVRWLSDRILQLRQSSDYRPTLHIDVY GTIGLIFAMEPKRCAEYIASLEQEAQGLPLYIEGPVDAGNKADQIQALAAITNELARLGSGVKIVADEWCNTFQDIVDFT DAKSCHMVQIKTPDLGSIHNIVDAVLYCNKHGMEAYQGGTCNETDISARTCVHVALAARPMRMLIKPGMGFDEGLNIVFN EMNRTIALLQTKD
Specific function: Unknown
COG id: COG3799
COG function: function code E; Methylaspartate ammonia-lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006395 - InterPro: IPR022662 - InterPro: IPR022665 [H]
Pfam domain/function: PF07476 MAAL_C; PF05034 MAAL_N [H]
EC number: =4.3.1.2 [H]
Molecular weight: Translated: 45470; Mature: 45470
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKQAIFTAGYSSFYFDDQQAIKNGAGHDGFIYTGAPVTPGFTAVRQAGECVSVQLILE CCHHHHHHHCCCCCEEECCHHHHHCCCCCCCEEEECCCCCCCHHHHHHCCCEEEEEEEEE NGAIAMGDCTAVQYSGAGGRDPLFLAANFIPFLNDYIKPLLEGRDVNTFLENARFFDTLR CCCEEECCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHEEE IEGKLLHTAVRYGLSQALLDATALATKRLKAEVVCDEWHLPCVPEPIPLFGQSGDDRYLA ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHH VDKMILKGVDVLPHALINNVEEKLGQKGEKLRTYVRWLSDRILQLRQSSDYRPTLHIDVY HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE GTIGLIFAMEPKRCAEYIASLEQEAQGLPLYIEGPVDAGNKADQIQALAAITNELARLGS EEEEEEEEECHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC GVKIVADEWCNTFQDIVDFTDAKSCHMVQIKTPDLGSIHNIVDAVLYCNKHGMEAYQGGT CCEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHCCCC CNETDISARTCVHVALAARPMRMLIKPGMGFDEGLNIVFNEMNRTIALLQTKD CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEEECC >Mature Secondary Structure MKIKQAIFTAGYSSFYFDDQQAIKNGAGHDGFIYTGAPVTPGFTAVRQAGECVSVQLILE CCHHHHHHHCCCCCEEECCHHHHHCCCCCCCEEEECCCCCCCHHHHHHCCCEEEEEEEEE NGAIAMGDCTAVQYSGAGGRDPLFLAANFIPFLNDYIKPLLEGRDVNTFLENARFFDTLR CCCEEECCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHEEE IEGKLLHTAVRYGLSQALLDATALATKRLKAEVVCDEWHLPCVPEPIPLFGQSGDDRYLA ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHH VDKMILKGVDVLPHALINNVEEKLGQKGEKLRTYVRWLSDRILQLRQSSDYRPTLHIDVY HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE GTIGLIFAMEPKRCAEYIASLEQEAQGLPLYIEGPVDAGNKADQIQALAAITNELARLGS EEEEEEEEECHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC GVKIVADEWCNTFQDIVDFTDAKSCHMVQIKTPDLGSIHNIVDAVLYCNKHGMEAYQGGT CCEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHCCCC CNETDISARTCVHVALAARPMRMLIKPGMGFDEGLNIVFNEMNRTIALLQTKD CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1420191; 8454064; 8428631; 1397267 [H]