| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yeiR [H]
Identifier: 218549589
GI number: 218549589
Start: 2321741
End: 2322733
Strand: Direct
Name: yeiR [H]
Synonym: EFER_2262
Alternate gene names: 218549589
Gene position: 2321741-2322733 (Clockwise)
Preceding gene: 218549588
Following gene: 218549590
Centisome position: 50.6
GC content: 50.15
Gene sequence:
>993_bases GTGGCTGTGACCAGAACCAACCTTATTACCGGCTTTCTCGGCAGCGGGAAAACAACATCAATCCTTCATCTTTTAGCGCA CAAAGATCCCGCTGAAAAATGGGCCGTCCTGGTTAACGAATTTGGCGAAGTGGGGATCGATGGTGCCCTGCTCGCGGATA GCGGAGCGTTATTGAAAGAAATCCCCGGCGGCTGTATGTGTTGTGTTAACGGCTTGCCCATGCAAGTGGGGCTGAATACT TTGCTGCGTCAGGGAAAGCCGGATCGTTTGCTTATTGAACCTACTGGACTGGGGCATCCTAAACAGATCCTTGATTTGTT AACCGCCCCGGTTTACGAACCCTGGATTGATCTGCGTGCCACTCTTTGCATTCTCGATCCCCGTCAGTTGCTGGATAAAA AAAGTGTTGATAACGAAAACTTCCGCGACCAGCTTGCCGCTGCGGATGTCATTGTGGCGAACAAAAGCGATCGGGCAACG GATGAAAGTGAAAACGCCCTGCAACAATGGTGGCAACAATATGGCGAAGATCGGCTACTGGTGCAGTGTGAACAAGGCCG AATCGATGGAAAACTCCTTGATCTGCCACGTAAAAATGTCACGGAGCTACCTGCCAGTGCAGCTCATAGTCATCAGACAG TAGAACGAAAAGGATTAGCAGCGCTAAGTTTACCAGCACATCAACGTTGGCGACGTAGCCTCAACAGTGGTCAGGGGCAT CAGGCCTGCGGCTGGATATTCGATGCAGATACCGTCTTTGACACCATTGGTGTTCTTGAATGGGCTCGTCTTGCCCCTGT TGCACGCGTTAAAGGTGTAATGCGTATTGCCGAAGGTCTGGTACGGATTAATCGTCAGGGTGACGATTTGCATATTGAAA CTCAAAATGTTGCTCCTCCCGATAGTCGTATCGAGCTTATTTCCAGTACCGATACCGACTGGAATGCCTTACAGAGCGCG CTGTTGAAGCTTCGTTTAGTTACAGGTGAGTAA
Upstream 100 bases:
>100_bases GTATAAGCGGGTGATCCCTCTGGTTACCCGCTCAGTTCTTCTCTTTTTGCTCTTTTTTGTCCAGGATTAATAGCAAATTT CGTTTCTCATCTTTTCTGGA
Downstream 100 bases:
>100_bases GGTTGCCCGCTGATTTTAGATAGTGAAGACGTAAATATGAAAATACAGCTAAACCGGATTCTGTTACTCAATTTATCAGG AGTGGGCTTATTCCTCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MAVTRTNLITGFLGSGKTTSILHLLAHKDPAEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNT LLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRQLLDKKSVDNENFRDQLAAADVIVANKSDRAT DESENALQQWWQQYGEDRLLVQCEQGRIDGKLLDLPRKNVTELPASAAHSHQTVERKGLAALSLPAHQRWRRSLNSGQGH QACGWIFDADTVFDTIGVLEWARLAPVARVKGVMRIAEGLVRINRQGDDLHIETQNVAPPDSRIELISSTDTDWNALQSA LLKLRLVTGE
Sequences:
>Translated_330_residues MAVTRTNLITGFLGSGKTTSILHLLAHKDPAEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNT LLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRQLLDKKSVDNENFRDQLAAADVIVANKSDRAT DESENALQQWWQQYGEDRLLVQCEQGRIDGKLLDLPRKNVTELPASAAHSHQTVERKGLAALSLPAHQRWRRSLNSGQGH QACGWIFDADTVFDTIGVLEWARLAPVARVKGVMRIAEGLVRINRQGDDLHIETQNVAPPDSRIELISSTDTDWNALQSA LLKLRLVTGE >Mature_329_residues AVTRTNLITGFLGSGKTTSILHLLAHKDPAEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTL LRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRQLLDKKSVDNENFRDQLAAADVIVANKSDRATD ESENALQQWWQQYGEDRLLVQCEQGRIDGKLLDLPRKNVTELPASAAHSHQTVERKGLAALSLPAHQRWRRSLNSGQGHQ ACGWIFDADTVFDTIGVLEWARLAPVARVKGVMRIAEGLVRINRQGDDLHIETQNVAPPDSRIELISSTDTDWNALQSAL LKLRLVTGE
Specific function: Unknown
COG id: COG0523
COG function: function code R; Putative GTPases (G3E family)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cobW C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI126722884, Length=238, Percent_Identity=27.3109243697479, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI33469141, Length=240, Percent_Identity=27.9166666666667, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI223941779, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI146231952, Length=238, Percent_Identity=26.890756302521, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI148727351, Length=240, Percent_Identity=27.5, Blast_Score=69, Evalue=8e-12, Organism=Escherichia coli, GI1788499, Length=326, Percent_Identity=88.6503067484662, Blast_Score=593, Evalue=1e-171, Organism=Escherichia coli, GI87082430, Length=109, Percent_Identity=40.3669724770642, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003495 - InterPro: IPR011629 [H]
Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]
EC number: NA
Molecular weight: Translated: 36284; Mature: 36153
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTRTNLITGFLGSGKTTSILHLLAHKDPAEKWAVLVNEFGEVGIDGALLADSGALLKE CCEEHHHHHEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHH IPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRA CCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHEH TLCILDPRQLLDKKSVDNENFRDQLAAADVIVANKSDRATDESENALQQWWQQYGEDRLL EEEEECHHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCEEE VQCEQGRIDGKLLDLPRKNVTELPASAAHSHQTVERKGLAALSLPAHQRWRRSLNSGQGH EEECCCCCCCEEECCCCCCHHHCCCHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCC QACGWIFDADTVFDTIGVLEWARLAPVARVKGVMRIAEGLVRINRQGDDLHIETQNVAPP CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC DSRIELISSTDTDWNALQSALLKLRLVTGE CHHEEEEECCCCCHHHHHHHHHHHEEECCC >Mature Secondary Structure AVTRTNLITGFLGSGKTTSILHLLAHKDPAEKWAVLVNEFGEVGIDGALLADSGALLKE CEEHHHHHEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHH IPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRA CCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHEH TLCILDPRQLLDKKSVDNENFRDQLAAADVIVANKSDRATDESENALQQWWQQYGEDRLL EEEEECHHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCEEE VQCEQGRIDGKLLDLPRKNVTELPASAAHSHQTVERKGLAALSLPAHQRWRRSLNSGQGH EEECCCCCCCEEECCCCCCHHHCCCHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCC QACGWIFDADTVFDTIGVLEWARLAPVARVKGVMRIAEGLVRINRQGDDLHIETQNVAPP CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC DSRIELISSTDTDWNALQSALLKLRLVTGE CHHEEEEECCCCCHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]