| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is yeiQ [H]
Identifier: 218549588
GI number: 218549588
Start: 2320154
End: 2321629
Strand: Direct
Name: yeiQ [H]
Synonym: EFER_2261
Alternate gene names: 218549588
Gene position: 2320154-2321629 (Clockwise)
Preceding gene: 218549586
Following gene: 218549589
Centisome position: 50.56
GC content: 48.37
Gene sequence:
>1476_bases GTGCCATCAATGAAAACCATCGCCTCAGCCCAACTTCCCCAGGGAGTGCTGACACCACATTATGATCGGCAAAAGCTACA ATCCCGTATTGTTCATTTTGGCTTTGGTGCGTTTCATCGGGCACATCAGGCTTTATTAACTGACCGGGTACTTAATGCCC GTGGTGGTGACTGGGGGATCTGCGAAATCAGCCTGTTTAGCGGCGATCATTTAATGCGTCAACTCCGTGAGCAGGATCAT CTATTTACTGTTCTTGAGAAAGGCGCTGAGGGCGATCAGGCCATTATTATTGGCGCTGTTCATGAATGTCTTAATGCGAA ACTGGATTCATTAGCCGCCATTATTGAGAAATTCTGCGAACCGCAGGTGGCGATTGTTTCACTGACCATTACAGAAAAAG GCTATTGCATCGACCCGTCTACGGGTGAACTTGATCTGCATAACGCAAGAATCCTTCATGACCTTGCATCTCCGCAAGAA CCCCATTCAGCACCAGGCATTCTGGTTGAAGCGCTGGCTCGTCGTCACCAGCGTGGCTTGCCACCCTTTACCGTGCTCTC TTGCGACAATATTCCTGACAATGGTCATGTTGTAAAAAATGCCGTGTTGGGAATGGCCGCAAGACGTTCACCAGAACTGG CAGAATGGATAAAAACACATGTCAGCTTCCCTGCCACAATGGTTGATCGCATTGTTCCTGCGGCAACAGAAGAGTCTCTG GCTGAAATATCTCAGCATCTGGGCGTTACTGATCCTTGTGCAATAAGTTGTGAGCCGTTTATTCAGTGGGTCGTGGAGGA TGATTTTGTTGCCGGAAGACCTGAATGGGAAGTCGCAGGTGTACAAATGGTCCGTGATGTCGTGCCATGGGAAGAGATGA AATTGCGGATGCTTAATGGCAGCCACTCATTTCTCGCTTATCTTGGCTATCTCTCAGGTTTTGCACATATCAACGACTGT ATGCAAGACAAGGTATTTCGCCAGGCTGCACGACGTTTAATGCTGCAGGAGCAAGCCCCCACGTTGCAAATTACGGACGT TGATCTCACGCTTTATGCCGACAAACTTATCGAACGCTTCGCTAACCCGGCTTTGAAGCATAAAACCTGGCAGATCGCGA TGGATGGCAGTCAGAAATTGCCTCAAAGAATGCTCGCCAGTATTCGTATTCATTTGCAACGTGAAAGTACCTGGCCTCTG CTGGCGCTAGGTGTTGCAGGCTGGATGCGTTACGTCAGTGGCTTTGACGATGCAAACAAAACCATAGATGTCCGTGATCC ACTTGGTGACAAAATCGCCATACTCGTGGCAAAAAGTACATCAGCGCAGCGAGTAAAAACCTTGTTATCACTCAATGAAA TATTCGGTGAGGACCTGCCAGACAATCCTCGATTTGTTGAGGCGATTAGCGAAGCATGGCAGCAAATCGAGCAATATGGC GCTCATCAAGCCGTCGCTCATGCACTAAAAAATTAA
Upstream 100 bases:
>100_bases TGATCTCCTTCACACTTCAGATTATTAACAAATCACACCAATATTATTTTCTGTCATATAACTTTAAAGTAACAATATTT AGTACAAACATTCTTAAGGT
Downstream 100 bases:
>100_bases CAATTTCTGCGGTATAAGCGGGTGATCCCTCTGGTTACCCGCTCAGTTCTTCTCTTTTTGCTCTTTTTTGTCCAGGATTA ATAGCAAATTTCGTTTCTCA
Product: sugar dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MPSMKTIASAQLPQGVLTPHYDRQKLQSRIVHFGFGAFHRAHQALLTDRVLNARGGDWGICEISLFSGDHLMRQLREQDH LFTVLEKGAEGDQAIIIGAVHECLNAKLDSLAAIIEKFCEPQVAIVSLTITEKGYCIDPSTGELDLHNARILHDLASPQE PHSAPGILVEALARRHQRGLPPFTVLSCDNIPDNGHVVKNAVLGMAARRSPELAEWIKTHVSFPATMVDRIVPAATEESL AEISQHLGVTDPCAISCEPFIQWVVEDDFVAGRPEWEVAGVQMVRDVVPWEEMKLRMLNGSHSFLAYLGYLSGFAHINDC MQDKVFRQAARRLMLQEQAPTLQITDVDLTLYADKLIERFANPALKHKTWQIAMDGSQKLPQRMLASIRIHLQRESTWPL LALGVAGWMRYVSGFDDANKTIDVRDPLGDKIAILVAKSTSAQRVKTLLSLNEIFGEDLPDNPRFVEAISEAWQQIEQYG AHQAVAHALKN
Sequences:
>Translated_491_residues MPSMKTIASAQLPQGVLTPHYDRQKLQSRIVHFGFGAFHRAHQALLTDRVLNARGGDWGICEISLFSGDHLMRQLREQDH LFTVLEKGAEGDQAIIIGAVHECLNAKLDSLAAIIEKFCEPQVAIVSLTITEKGYCIDPSTGELDLHNARILHDLASPQE PHSAPGILVEALARRHQRGLPPFTVLSCDNIPDNGHVVKNAVLGMAARRSPELAEWIKTHVSFPATMVDRIVPAATEESL AEISQHLGVTDPCAISCEPFIQWVVEDDFVAGRPEWEVAGVQMVRDVVPWEEMKLRMLNGSHSFLAYLGYLSGFAHINDC MQDKVFRQAARRLMLQEQAPTLQITDVDLTLYADKLIERFANPALKHKTWQIAMDGSQKLPQRMLASIRIHLQRESTWPL LALGVAGWMRYVSGFDDANKTIDVRDPLGDKIAILVAKSTSAQRVKTLLSLNEIFGEDLPDNPRFVEAISEAWQQIEQYG AHQAVAHALKN >Mature_490_residues PSMKTIASAQLPQGVLTPHYDRQKLQSRIVHFGFGAFHRAHQALLTDRVLNARGGDWGICEISLFSGDHLMRQLREQDHL FTVLEKGAEGDQAIIIGAVHECLNAKLDSLAAIIEKFCEPQVAIVSLTITEKGYCIDPSTGELDLHNARILHDLASPQEP HSAPGILVEALARRHQRGLPPFTVLSCDNIPDNGHVVKNAVLGMAARRSPELAEWIKTHVSFPATMVDRIVPAATEESLA EISQHLGVTDPCAISCEPFIQWVVEDDFVAGRPEWEVAGVQMVRDVVPWEEMKLRMLNGSHSFLAYLGYLSGFAHINDCM QDKVFRQAARRLMLQEQAPTLQITDVDLTLYADKLIERFANPALKHKTWQIAMDGSQKLPQRMLASIRIHLQRESTWPLL ALGVAGWMRYVSGFDDANKTIDVRDPLGDKIAILVAKSTSAQRVKTLLSLNEIFGEDLPDNPRFVEAISEAWQQIEQYGA HQAVAHALKN
Specific function: Unknown
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxuB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788497, Length=487, Percent_Identity=82.7515400410678, Blast_Score=841, Evalue=0.0, Organism=Escherichia coli, GI1790779, Length=486, Percent_Identity=55.761316872428, Blast_Score=552, Evalue=1e-158, Organism=Escherichia coli, GI1787823, Length=469, Percent_Identity=54.5842217484009, Blast_Score=541, Evalue=1e-155, Organism=Escherichia coli, GI48994885, Length=422, Percent_Identity=23.4597156398104, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1790028, Length=257, Percent_Identity=26.4591439688716, Blast_Score=88, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6324401, Length=476, Percent_Identity=37.8151260504202, Blast_Score=350, Evalue=2e-97, Organism=Saccharomyces cerevisiae, GI6320765, Length=476, Percent_Identity=37.8151260504202, Blast_Score=350, Evalue=2e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 54675; Mature: 54544
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00974 MANNITOL_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSMKTIASAQLPQGVLTPHYDRQKLQSRIVHFGFGAFHRAHQALLTDRVLNARGGDWGI CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE CEISLFSGDHLMRQLREQDHLFTVLEKGAEGDQAIIIGAVHECLNAKLDSLAAIIEKFCE EEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC PQVAIVSLTITEKGYCIDPSTGELDLHNARILHDLASPQEPHSAPGILVEALARRHQRGL CCEEEEEEEEECCCEEECCCCCCEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC PPFTVLSCDNIPDNGHVVKNAVLGMAARRSPELAEWIKTHVSFPATMVDRIVPAATEESL CCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHH AEISQHLGVTDPCAISCEPFIQWVVEDDFVAGRPEWEVAGVQMVRDVVPWEEMKLRMLNG HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC SHSFLAYLGYLSGFAHINDCMQDKVFRQAARRLMLQEQAPTLQITDVDLTLYADKLIERF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHH ANPALKHKTWQIAMDGSQKLPQRMLASIRIHLQRESTWPLLALGVAGWMRYVSGFDDANK CCHHHHCCEEEEEECCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC TIDVRDPLGDKIAILVAKSTSAQRVKTLLSLNEIFGEDLPDNPRFVEAISEAWQQIEQYG EEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC AHQAVAHALKN HHHHHHHHHCC >Mature Secondary Structure PSMKTIASAQLPQGVLTPHYDRQKLQSRIVHFGFGAFHRAHQALLTDRVLNARGGDWGI CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE CEISLFSGDHLMRQLREQDHLFTVLEKGAEGDQAIIIGAVHECLNAKLDSLAAIIEKFCE EEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC PQVAIVSLTITEKGYCIDPSTGELDLHNARILHDLASPQEPHSAPGILVEALARRHQRGL CCEEEEEEEEECCCEEECCCCCCEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC PPFTVLSCDNIPDNGHVVKNAVLGMAARRSPELAEWIKTHVSFPATMVDRIVPAATEESL CCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHH AEISQHLGVTDPCAISCEPFIQWVVEDDFVAGRPEWEVAGVQMVRDVVPWEEMKLRMLNG HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC SHSFLAYLGYLSGFAHINDCMQDKVFRQAARRLMLQEQAPTLQITDVDLTLYADKLIERF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHH ANPALKHKTWQIAMDGSQKLPQRMLASIRIHLQRESTWPLLALGVAGWMRYVSGFDDANK CCHHHHCCEEEEEECCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC TIDVRDPLGDKIAILVAKSTSAQRVKTLLSLNEIFGEDLPDNPRFVEAISEAWQQIEQYG EEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC AHQAVAHALKN HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]