| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yeiT [H]
Identifier: 218549559
GI number: 218549559
Start: 2286860
End: 2288098
Strand: Direct
Name: yeiT [H]
Synonym: EFER_2231
Alternate gene names: 218549559
Gene position: 2286860-2288098 (Clockwise)
Preceding gene: 218549558
Following gene: 218549560
Centisome position: 49.84
GC content: 51.09
Gene sequence:
>1239_bases ATGCCGCAACAAAATTATCTGGATGAACTCACTCCGGCTTTTACGCCTTTACTGGCAATAAAAGAGGCATCCCGCTGTTT ATTATGTCATGACGCCCCCTGTAGTCAGGCTTGTCCGGCGCAAACTGACCCAGGGAAATTTATCCGCTCAATCTACTTTC GTAATTTTAAAGGCGCTGCCGAGACAATTCGCGAAAATAATGCCCTCGGTGCCGTTTGTGCCAGAGTGTGTCCAACGGAG AAATTATGTCAAAGCGGTTGTACCCGTGCCGGTGTTGATGATCCAATTGATATTGGCCGCTTGCAGCGTTTTATCACTGA TTTTGAACAACAAACCGGGATGGATATTTATCAGCCAGGCACTAAAACGCTCGGTAAGGTAGCGATTATTGGCGCGGGCC CTGCCGGGTTACAGGCCAGTGTGACGCTGACAAATATGGGTTACGACGTCACTATTTATGAAAAAGAACCACAGCCCGGT GGCTGGCTATGTAACGGTATTCCGCAATTTCGGTTACCGCAATCGGTGCTGGATGCAGAAATCGCCCGTATTGAAAAAAT GGGCGTGACCATTAAGTGCAACAACGAAGTCGGTAAAACAATCACCCTGGAGCAACTAAAAGCGGAAAACCGCGCAGTAC TTGTCACCGTAGGGTTGTCGGGCGGTTCCGGGCTACCGCTGTTTGAGCATAGCGACGTTGAGATTGCCGTCGACTTCTTG CAACGTGCACGACAGGCGCAGGGCGATATCAGCATTCCACAAAGCGCATTAATTATCGGCGGCGGTGATGTCGCGATGGA CGTTGCCAGCACGCTGAAAGTTCTCGGCTGTCAGGCGGTAACCTGCGTAGCACGTGAAGAGTTAGATGCGTTTCCGGCAA GCGAAAAAGAGTTTGCCAGCGCCCGGGAACTGGGCGTTTCGATCATCGATGGATTCACACCAGTAGCCGTGGAAGCCAAT AAAGTCACGTTTAAGCATGTACGGTTACCGGGCGAACTGACGATGGCGGCAGATAAAATTATTCTCGCCGTCGGCCAGCA TGCCAGACTGGATGCCTTTGCGGAGTTAGAGCCGCAGCGTAACACCATCAAAACACAAAATTACCAGACCCGCGACCCGC AAGTCTTTGCTGCTGGCGATATTGTTGAGGGTGACAAAACCGTGGTCTATGCAGTGAAAACCGGGAAAGAAGCCGCCGGG GCGATTCATCACTATTTAGAGGGAGCTTGCTCATGTTAA
Upstream 100 bases:
>100_bases TGACTGGGGTGAGCGAACGCAGACGCAGCACATGCAACTTGAAGTATGACGAGTATATTTAGCGTTCGCCTTAATTACTC ATAGCATTAAGGAAGATCAC
Downstream 100 bases:
>100_bases CGAAAGATCTTTCGATTACTTTTTGCGGCGTGAAGTTTCCCAACCCGTTCTGCCTCTCTTCTTCGCCGGTAGGCAACTGC TATGAGATGTGCGCCAAAGC
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTE KLCQSGCTRAGVDDPIDIGRLQRFITDFEQQTGMDIYQPGTKTLGKVAIIGAGPAGLQASVTLTNMGYDVTIYEKEPQPG GWLCNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGKTITLEQLKAENRAVLVTVGLSGGSGLPLFEHSDVEIAVDFL QRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDAFPASEKEFASARELGVSIIDGFTPVAVEAN KVTFKHVRLPGELTMAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAG AIHHYLEGACSC
Sequences:
>Translated_412_residues MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTE KLCQSGCTRAGVDDPIDIGRLQRFITDFEQQTGMDIYQPGTKTLGKVAIIGAGPAGLQASVTLTNMGYDVTIYEKEPQPG GWLCNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGKTITLEQLKAENRAVLVTVGLSGGSGLPLFEHSDVEIAVDFL QRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDAFPASEKEFASARELGVSIIDGFTPVAVEAN KVTFKHVRLPGELTMAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAG AIHHYLEGACSC >Mature_411_residues PQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEK LCQSGCTRAGVDDPIDIGRLQRFITDFEQQTGMDIYQPGTKTLGKVAIIGAGPAGLQASVTLTNMGYDVTIYEKEPQPGG WLCNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGKTITLEQLKAENRAVLVTVGLSGGSGLPLFEHSDVEIAVDFLQ RARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDAFPASEKEFASARELGVSIIDGFTPVAVEANK VTFKHVRLPGELTMAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAGA IHHYLEGACSC
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli glutamate synthase [NADPH] small chain (GltD) and to E.coli AegA [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=439, Percent_Identity=31.4350797266515, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI237757300, Length=90, Percent_Identity=47.7777777777778, Blast_Score=89, Evalue=7e-18, Organism=Escherichia coli, GI1788468, Length=412, Percent_Identity=96.1165048543689, Blast_Score=812, Evalue=0.0, Organism=Escherichia coli, GI1788811, Length=449, Percent_Identity=32.739420935412, Blast_Score=197, Evalue=8e-52, Organism=Escherichia coli, GI1789606, Length=442, Percent_Identity=32.1266968325792, Blast_Score=190, Evalue=2e-49, Organism=Escherichia coli, GI87082180, Length=449, Percent_Identity=30.2895322939866, Blast_Score=171, Evalue=6e-44, Organism=Escherichia coli, GI1789243, Length=402, Percent_Identity=29.3532338308458, Blast_Score=134, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71984108, Length=441, Percent_Identity=32.8798185941043, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17570289, Length=452, Percent_Identity=26.9911504424779, Blast_Score=139, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6320030, Length=458, Percent_Identity=25.3275109170306, Blast_Score=130, Evalue=4e-31, Organism=Drosophila melanogaster, GI24640763, Length=434, Percent_Identity=30.8755760368664, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI18858217, Length=434, Percent_Identity=30.8755760368664, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24665547, Length=445, Percent_Identity=28.7640449438202, Blast_Score=135, Evalue=7e-32, Organism=Drosophila melanogaster, GI24665543, Length=445, Percent_Identity=28.7640449438202, Blast_Score=135, Evalue=7e-32, Organism=Drosophila melanogaster, GI28574881, Length=445, Percent_Identity=28.7640449438202, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI24665539, Length=445, Percent_Identity=28.7640449438202, Blast_Score=135, Evalue=8e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR009051 - InterPro: IPR016040 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 44199; Mature: 44068
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAA CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHH ETIRENNALGAVCARVCPTEKLCQSGCTRAGVDDPIDIGRLQRFITDFEQQTGMDIYQPG HHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCC TKTLGKVAIIGAGPAGLQASVTLTNMGYDVTIYEKEPQPGGWLCNGIPQFRLPQSVLDAE CCCCCCEEEEECCCCCCEEEEEEEECCEEEEEEECCCCCCCEEECCCCCCCCCHHHHHHH IARIEKMGVTIKCNNEVGKTITLEQLKAENRAVLVTVGLSGGSGLPLFEHSDVEIAVDFL HHHHHHHCEEEEECCCCCCEEEHHHHCCCCCEEEEEEEECCCCCCCCEECCCHHHHHHHH QRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDAFPASEKEFAS HHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ARELGVSIIDGFTPVAVEANKVTFKHVRLPGELTMAADKIILAVGQHARLDAFAELEPQR HHHHCHHHHCCCCCEEEECCCEEEEEEECCCCHHHHHCEEEEEECCCCCCCHHHHCCCCC NTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAGAIHHYLEGACSC CCCCCCCCCCCCCEEEEECCEECCCCEEEEEEECCCHHHHHHHHHHHHCCCC >Mature Secondary Structure PQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAA CCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHH ETIRENNALGAVCARVCPTEKLCQSGCTRAGVDDPIDIGRLQRFITDFEQQTGMDIYQPG HHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCC TKTLGKVAIIGAGPAGLQASVTLTNMGYDVTIYEKEPQPGGWLCNGIPQFRLPQSVLDAE CCCCCCEEEEECCCCCCEEEEEEEECCEEEEEEECCCCCCCEEECCCCCCCCCHHHHHHH IARIEKMGVTIKCNNEVGKTITLEQLKAENRAVLVTVGLSGGSGLPLFEHSDVEIAVDFL HHHHHHHCEEEEECCCCCCEEEHHHHCCCCCEEEEEEEECCCCCCCCEECCCHHHHHHHH QRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDAFPASEKEFAS HHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ARELGVSIIDGFTPVAVEANKVTFKHVRLPGELTMAADKIILAVGQHARLDAFAELEPQR HHHHCHHHHCCCCCEEEECCCEEEEEEECCCCHHHHHCEEEEEECCCCCCCHHHHCCCCC NTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAGAIHHYLEGACSC CCCCCCCCCCCCCEEEEECCEECCCCEEEEEEECCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]