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The map label for this gene is wcaD [H]

Identifier: 218549471

GI number: 218549471

Start: 2171060

End: 2172352

Strand: Reverse

Name: wcaD [H]

Synonym: EFER_2140

Alternate gene names: 218549471

Gene position: 2172352-2171060 (Counterclockwise)

Preceding gene: 218549472

Following gene: 218549470

Centisome position: 47.34

GC content: 43.46

Gene sequence:

>1293_bases
TTGGTACCACGCTGGCTGAGTTCAGCCAGCGCAGCCGCGCCGCCTACAGTGGACAACAGATGCTGGAGGAGTATGTCAAC
TTCTATCAGAATCTGTAGCTACCTGCTGCTGCCGCTGATTTACCTGCTGGTTAACGTCAAAATCGCCCAGCTTGGCGAAA
GTTTCCCCATCACCATCGTCACTTTTTTACCTGTCTTGTTACTGCTGTTTTTAGAGCGCATCAGCGTTAAAAAATTGATG
ATTGCCTTAGGGATTGGCGCGGGACTCACGGCGTTTAACTACTTGTTTGGTCAGTCGTTGGATGCCAGTAAATACGTCAC
TTCAACCATGCTGTTTGTCTATATTGTGATCATTATTGGCATGGTGTGGAGTATTCGCTTTAAAACGATTTCGCCACACA
ACCATCGCAAGATATTACGTTTCTTTTATCTGGTGGTCGGGCTGGTGGTGGCGCTGGCGGCGGTGGAGATGGCGCAAATT
ATCCTCACTGGCGGCAGCAGTATTATGGAGTCGATTTCGAAATATCTGATTTACAGCAACAGTTATGTGCTGAATTTCAT
TAAATTCGGCGGCAAGCGCACGACAGCACTTTATTTCGAACCGGCATTTTTCGCTCTGGCATTAATCTCAATTTGGCTCA
GTATCAAACAGTTTGGTATCAAAACGCCTAAAACCGATGCTATGATTCTCGCAGGGATAATATTATCCGGATCGTTTTCA
GGGGTTATGACCTTTATCCTGTTTTATTTGTTGGAGTGGGCGTTTCAATATCTGAATAAAGAGGCGATTAAGAAAAAGTT
ACCGTTAGCATTGATTTCTCTGGCTGTATTCCTGGTTGGTGTGGTAATCGCGTTTCCTTATATTTCCACCCGCTTGGGCG
ATTTAGGTACGGAAGGATCGTCATCGTATTATCGTATTGTCGGTCCACTGGTGATGGTCGGTTATTCTTTGAGCCATATT
GACGGTGTAGTCAGATTTGGCTCACTTTATGAATATGTCGCATCATTCGGAATATTTAACGGTGCGGATGTCGGAAAAAC
CATAGACAATGGTTTGTATCTGCTGATTATTTATTTTTCCTGGTTCGCAGTGCTTTTATCACTGTGGTATATGGGGAAAG
TGATAAAAATGATGATCAACGCTTTTGGTGATAATCGCAATTTTCGTGTGCAGCTCTATCTTTTTACTCCGGTGTCGCTG
TTTTTTACCGGTTCGATATTTAGCCCGGAATATGCATTTTTAATCGTCTGTCCATTTATTTTGCGAAAAGCGTTAAATAT
ACACCCTAAATAA

Upstream 100 bases:

>100_bases
GCGCGGGAAGTGCTGCAAAAATCCGGCGGTAAAACCGTCAGCGAAGAAGAGGTGCTGCAACTGGTGCAGTTAAGCAAACC
GGAAATCGCGCAGGCGATAT

Downstream 100 bases:

>100_bases
TTCGAGTTGCAGGAAGTTGGTGACGCAGCGAATCCCCAGGAGCGTACACGAGTACGTGACTGGGGTGAGCGAGGAAAACC
AACGCACATGCAGCTTGAAG

Product: colanic acid biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MVPRWLSSASAAAPPTVDNRCWRSMSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLLLFLERISVKKLM
IALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIRFKTISPHNHRKILRFFYLVVGLVVALAAVEMAQI
ILTGGSSIMESISKYLIYSNSYVLNFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFS
GVMTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGSSSYYRIVGPLVMVGYSLSHI
DGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFSWFAVLLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSL
FFTGSIFSPEYAFLIVCPFILRKALNIHPK

Sequences:

>Translated_430_residues
MVPRWLSSASAAAPPTVDNRCWRSMSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLLLFLERISVKKLM
IALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIRFKTISPHNHRKILRFFYLVVGLVVALAAVEMAQI
ILTGGSSIMESISKYLIYSNSYVLNFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFS
GVMTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGSSSYYRIVGPLVMVGYSLSHI
DGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFSWFAVLLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSL
FFTGSIFSPEYAFLIVCPFILRKALNIHPK
>Mature_430_residues
MVPRWLSSASAAAPPTVDNRCWRSMSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLLLFLERISVKKLM
IALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIRFKTISPHNHRKILRFFYLVVGLVVALAAVEMAQI
ILTGGSSIMESISKYLIYSNSYVLNFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFS
GVMTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGSSSYYRIVGPLVMVGYSLSHI
DGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFSWFAVLLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSL
FFTGSIFSPEYAFLIVCPFILRKALNIHPK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788369, Length=403, Percent_Identity=99.5037220843672, Blast_Score=790, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48108; Mature: 48108

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPRWLSSASAAAPPTVDNRCWRSMSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
TFLPVLLLLFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
MVWSIRFKTISPHNHRKILRFFYLVVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSN
HHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
SYVLNFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFS
HHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHH
GVMTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGS
HHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SSYYRIVGPLVMVGYSLSHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFS
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHH
WFAVLLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIVCPFI
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHH
LRKALNIHPK
HHHHHCCCCC
>Mature Secondary Structure
MVPRWLSSASAAAPPTVDNRCWRSMSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
TFLPVLLLLFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
MVWSIRFKTISPHNHRKILRFFYLVVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSN
HHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
SYVLNFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFS
HHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHH
GVMTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGS
HHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SSYYRIVGPLVMVGYSLSHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFS
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHH
WFAVLLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIVCPFI
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHH
LRKALNIHPK
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8759852; 9278503 [H]