Click here to switch to the map view.

The map label for this gene is wcaE [H]

Identifier: 218549470

GI number: 218549470

Start: 2170188

End: 2170934

Strand: Reverse

Name: wcaE [H]

Synonym: EFER_2139

Alternate gene names: 218549470

Gene position: 2170934-2170188 (Counterclockwise)

Preceding gene: 218549471

Following gene: 218549469

Centisome position: 47.31

GC content: 46.18

Gene sequence:

>747_bases
ATGTTGCTTAGCATAATCACCGTCGCGTTTCGTAACCTTGAAGGGATAGTCAAAACACATGCCTCGCTGGCGCATCTGGC
GCAGGCTGACGATATCAGCTTCGAATGGATTGTTGTCGATGGCGGTTCCAATGACGGCACCCGTGAGTATCTGGAAAATC
TCAATGGTATCTATAACCTACGCTTTGTCAGTGAACCAGATAAGGGCATCTACGACGCCATGAACAAAGGCATTGCGATG
GCACAAGGCAAGTTTGCGCTGTTTCTCAACTCGGGCGATATTTTTCATCAGGATGCCGCAAATTTTGTCCGTAGATTAAA
AATGCAAAAAGATAACGTGATGATTACCGGCGATGCGCTGCTGGATTTTGGCGACGGGCATAAAATTAAACGTCGCGCTA
AACCGGGCTGGTATATTTATCACAGCCTGCCCGCCAGCCATCAGGCGATATTTTTCCCGGTATCCGGCTTGAAAAAATGG
CGTTATGATCTGGAATATAAAGTTTCATCCGATTATGCGCTGGCGGCCAAAATGTATAAAGCCGGTTATGCGTTTAAAAA
ACTCAATGGGCTGGTGTCTGAATTTTCTATGGGTGGGGTATCTACCACCAATAATATGGAATTGTGTGCTGACGCGAAAA
AAGTCCAACGGCAAATATTACATGTGCCTGGCTTCTGGGCTGAATTATCCTGGCATTTACGCCAGCGCACGACCTCAAAG
ACGAAAGCCTTATATAACAAAGTCTGA

Upstream 100 bases:

>100_bases
CAGCGAATCCCCAGGAGCGTACACGAGTACGTGACTGGGGTGAGCGAGGAAAACCAACGCACATGCAGCTTGAAGTATGA
CGGGTATTACGAGGTAAAAA

Downstream 100 bases:

>100_bases
ATATAAGGAATACCAATGCAAGATTTAAGCGGTTTCTCGGTGCCGAAAGGGTTCCGGGGCGGCAACGCTATTAAAGTGCA
ATTGTGGTGGGCAGTACAGG

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLLSIITVAFRNLEGIVKTHASLAHLAQADDISFEWIVVDGGSNDGTREYLENLNGIYNLRFVSEPDKGIYDAMNKGIAM
AQGKFALFLNSGDIFHQDAANFVRRLKMQKDNVMITGDALLDFGDGHKIKRRAKPGWYIYHSLPASHQAIFFPVSGLKKW
RYDLEYKVSSDYALAAKMYKAGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQILHVPGFWAELSWHLRQRTTSK
TKALYNKV

Sequences:

>Translated_248_residues
MLLSIITVAFRNLEGIVKTHASLAHLAQADDISFEWIVVDGGSNDGTREYLENLNGIYNLRFVSEPDKGIYDAMNKGIAM
AQGKFALFLNSGDIFHQDAANFVRRLKMQKDNVMITGDALLDFGDGHKIKRRAKPGWYIYHSLPASHQAIFFPVSGLKKW
RYDLEYKVSSDYALAAKMYKAGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQILHVPGFWAELSWHLRQRTTSK
TKALYNKV
>Mature_248_residues
MLLSIITVAFRNLEGIVKTHASLAHLAQADDISFEWIVVDGGSNDGTREYLENLNGIYNLRFVSEPDKGIYDAMNKGIAM
AQGKFALFLNSGDIFHQDAANFVRRLKMQKDNVMITGDALLDFGDGHKIKRRAKPGWYIYHSLPASHQAIFFPVSGLKKW
RYDLEYKVSSDYALAAKMYKAGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQILHVPGFWAELSWHLRQRTTSK
TKALYNKV

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788368, Length=248, Percent_Identity=97.1774193548387, Blast_Score=504, Evalue=1e-144,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 27980; Mature: 27980

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSIITVAFRNLEGIVKTHASLAHLAQADDISFEWIVVDGGSNDGTREYLENLNGIYNL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCEEEE
RFVSEPDKGIYDAMNKGIAMAQGKFALFLNSGDIFHQDAANFVRRLKMQKDNVMITGDAL
EEECCCCCHHHHHHHCCEEEECCCEEEEEECCCEEHHHHHHHHHHHHCCCCCEEEEECEE
LDFGDGHKIKRRAKPGWYIYHSLPASHQAIFFPVSGLKKWRYDLEYKVSSDYALAAKMYK
EECCCCCHHHHCCCCCEEEEECCCCCCCEEEEEHHHHHHHCCCEEEEECCCHHHHHHHHH
AGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQILHVPGFWAELSWHLRQRTTSK
HCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TKALYNKV
HHHHHHCC
>Mature Secondary Structure
MLLSIITVAFRNLEGIVKTHASLAHLAQADDISFEWIVVDGGSNDGTREYLENLNGIYNL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCEEEE
RFVSEPDKGIYDAMNKGIAMAQGKFALFLNSGDIFHQDAANFVRRLKMQKDNVMITGDAL
EEECCCCCHHHHHHHCCEEEECCCEEEEEECCCEEHHHHHHHHHHHHCCCCCEEEEECEE
LDFGDGHKIKRRAKPGWYIYHSLPASHQAIFFPVSGLKKWRYDLEYKVSSDYALAAKMYK
EECCCCCHHHHCCCCCEEEEECCCCCCCEEEEEHHHHHHHCCCEEEEECCCHHHHHHHHH
AGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQILHVPGFWAELSWHLRQRTTSK
HCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TKALYNKV
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759852; 9278503 [H]