| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549452
Identifier: 218549452
GI number: 218549452
Start: 2149194
End: 2150384
Strand: Reverse
Name: 218549452
Synonym: EFER_2121
Alternate gene names: NA
Gene position: 2150384-2149194 (Counterclockwise)
Preceding gene: 218549453
Following gene: 218549451
Centisome position: 46.86
GC content: 29.14
Gene sequence:
>1191_bases ATGCCTTATTTACAACAATGGCTATTCAATCCAGGAGGTATAAAAAGAGTGAAACTCTTCTACAGAGTAAATGATTATCA TCCTTTTGACATAAAGGATAGTTCTGCAGCTAGTTCAGTTCGACACAGAGTCGACCGAGTTTGCAGATGTCTTCCGGATG CCACCAAATCAATAATATATTCAATTGTAAAAGAAAAAAATGTTTTATTGATTAAACGAAATGTGAATAATACTGAAAAC AACCAACAGTGCATAACATATTTTGTTCCTTCAAATCCTTTAGGGATACTTATAAAAATATTTCTTTCGCTCTGTCTAAT GATATATTTATTATTTAAAACTTTAAAGAAAGAAAATTATCTCCTTATATACAATTTATTGCCAGTTCATATTTTTCCGT ATCTTATAGCGTCTTATATATATCCGAGTTTTTTGAAAAAAACAATTTTTCAGGTTGAAGAATTATATAGCATGTACAAT TTTTCGTTTATTAAGAACCTTTTAAATCTTCACTCAGAAAAGTTTGTTTTTAGAAATGGTCTTAACTTTATAGTTGTTAA TGAGAATGTTAAAAAAATTATTAAGCAAAAAAAAGCAAAATCAATAGTTGATTATGGGTACAATACAAGGAATAGCAAGG CTTACAATAAGTTAAGTGTATCAGATACTATTGTTTATACTGGAAGGTTAGACTATGTTGGGGGGGTTGAGGTACTTTTA GAAGCAATAAGTAACCTACCTAGTGATATTAGAAATAAATTTGTTATAACAGGTTATGGGGGATTAAAAGAACAGGTGGT TGCTCATGCAAATGAGCTGAATATTAAATTTAAAGGATTTCTTAGCGAAGCTGATTATGATTCATTATTATCTAGTGCAA AAATTAGTATTAATCCACTAAGATCAAAATGTAATTTTTCTTTATATTCATTTCCTTCGAAAGTACTTCAATATCTGGAA TATGGATGTGTCGTTATCTCAAGTGGAATAGAGCAGCCAGAATTGGAATATTATTTTTCTGATGAATTATTTTCATATAA GAATGATGATGCTCGGACACTCAGTATGTTAATTATGGAAATAAATTCGCGTAACTTCGATAAAGTAAAAATTATAGATA AATATCACGTCTTTATGAAAAATAAAGAAAAAAAGCTACGCGCCTTCTTCTTATCTGTATTTGAGGGATAA
Upstream 100 bases:
>100_bases AAAAGAATAAAAAATCCATATTTTTTTATATCACTTATAACTTTAATTATCATGTGTCAGGATGTTGTACTTGAAGGTAA TATGATGTTACTAATCAGCT
Downstream 100 bases:
>100_bases TTCTGTGAAATTGGCTATTTTTGATATATGCGGCACATTATATTATGACAATACAACATATTCTTTTTTAATCTGGTTAT CTAACAAAGGAATAATTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MPYLQQWLFNPGGIKRVKLFYRVNDYHPFDIKDSSAASSVRHRVDRVCRCLPDATKSIIYSIVKEKNVLLIKRNVNNTEN NQQCITYFVPSNPLGILIKIFLSLCLMIYLLFKTLKKENYLLIYNLLPVHIFPYLIASYIYPSFLKKTIFQVEELYSMYN FSFIKNLLNLHSEKFVFRNGLNFIVVNENVKKIIKQKKAKSIVDYGYNTRNSKAYNKLSVSDTIVYTGRLDYVGGVEVLL EAISNLPSDIRNKFVITGYGGLKEQVVAHANELNIKFKGFLSEADYDSLLSSAKISINPLRSKCNFSLYSFPSKVLQYLE YGCVVISSGIEQPELEYYFSDELFSYKNDDARTLSMLIMEINSRNFDKVKIIDKYHVFMKNKEKKLRAFFLSVFEG
Sequences:
>Translated_396_residues MPYLQQWLFNPGGIKRVKLFYRVNDYHPFDIKDSSAASSVRHRVDRVCRCLPDATKSIIYSIVKEKNVLLIKRNVNNTEN NQQCITYFVPSNPLGILIKIFLSLCLMIYLLFKTLKKENYLLIYNLLPVHIFPYLIASYIYPSFLKKTIFQVEELYSMYN FSFIKNLLNLHSEKFVFRNGLNFIVVNENVKKIIKQKKAKSIVDYGYNTRNSKAYNKLSVSDTIVYTGRLDYVGGVEVLL EAISNLPSDIRNKFVITGYGGLKEQVVAHANELNIKFKGFLSEADYDSLLSSAKISINPLRSKCNFSLYSFPSKVLQYLE YGCVVISSGIEQPELEYYFSDELFSYKNDDARTLSMLIMEINSRNFDKVKIIDKYHVFMKNKEKKLRAFFLSVFEG >Mature_395_residues PYLQQWLFNPGGIKRVKLFYRVNDYHPFDIKDSSAASSVRHRVDRVCRCLPDATKSIIYSIVKEKNVLLIKRNVNNTENN QQCITYFVPSNPLGILIKIFLSLCLMIYLLFKTLKKENYLLIYNLLPVHIFPYLIASYIYPSFLKKTIFQVEELYSMYNF SFIKNLLNLHSEKFVFRNGLNFIVVNENVKKIIKQKKAKSIVDYGYNTRNSKAYNKLSVSDTIVYTGRLDYVGGVEVLLE AISNLPSDIRNKFVITGYGGLKEQVVAHANELNIKFKGFLSEADYDSLLSSAKISINPLRSKCNFSLYSFPSKVLQYLEY GCVVISSGIEQPELEYYFSDELFSYKNDDARTLSMLIMEINSRNFDKVKIIDKYHVFMKNKEKKLRAFFLSVFEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46008; Mature: 45877
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYLQQWLFNPGGIKRVKLFYRVNDYHPFDIKDSSAASSVRHRVDRVCRCLPDATKSIIY CCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH SIVKEKNVLLIKRNVNNTENNQQCITYFVPSNPLGILIKIFLSLCLMIYLLFKTLKKENY HHHCCCCEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE LLIYNLLPVHIFPYLIASYIYPSFLKKTIFQVEELYSMYNFSFIKNLLNLHSEKFVFRNG EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC LNFIVVNENVKKIIKQKKAKSIVDYGYNTRNSKAYNKLSVSDTIVYTGRLDYVGGVEVLL CEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHH EAISNLPSDIRNKFVITGYGGLKEQVVAHANELNIKFKGFLSEADYDSLLSSAKISINPL HHHHHCCHHHHCCEEEEECCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHCCCEEEEEH RSKCNFSLYSFPSKVLQYLEYGCVVISSGIEQPELEYYFSDELFSYKNDDARTLSMLIME HHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHH INSRNFDKVKIIDKYHVFMKNKEKKLRAFFLSVFEG HCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure PYLQQWLFNPGGIKRVKLFYRVNDYHPFDIKDSSAASSVRHRVDRVCRCLPDATKSIIY CCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH SIVKEKNVLLIKRNVNNTENNQQCITYFVPSNPLGILIKIFLSLCLMIYLLFKTLKKENY HHHCCCCEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE LLIYNLLPVHIFPYLIASYIYPSFLKKTIFQVEELYSMYNFSFIKNLLNLHSEKFVFRNG EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC LNFIVVNENVKKIIKQKKAKSIVDYGYNTRNSKAYNKLSVSDTIVYTGRLDYVGGVEVLL CEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHH EAISNLPSDIRNKFVITGYGGLKEQVVAHANELNIKFKGFLSEADYDSLLSSAKISINPL HHHHHCCHHHHCCEEEEECCCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHCCCEEEEEH RSKCNFSLYSFPSKVLQYLEYGCVVISSGIEQPELEYYFSDELFSYKNDDARTLSMLIME HHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHH INSRNFDKVKIIDKYHVFMKNKEKKLRAFFLSVFEG HCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA