| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549366
Identifier: 218549366
GI number: 218549366
Start: 2084927
End: 2086771
Strand: Reverse
Name: 218549366
Synonym: EFER_2034
Alternate gene names: NA
Gene position: 2086771-2084927 (Counterclockwise)
Preceding gene: 218549367
Following gene: 218549365
Centisome position: 45.48
GC content: 46.02
Gene sequence:
>1845_bases ATGATGAAAGTAACTGCAAACGGTAAGACATTTACCTTTCCTGATGGTACGAGCACCGAAGATATTGGCACCGCCATTGA TGAGTATTTTGCTGGTCAGGCTGTTCAGCAACAAACAGTTAATCAGGCCAATAATGCACCAACACAGGAAGAACCATCAT TGATGCAACAAGCTGGCGATTGGCTCACTGGTGGTCAAAGTGCAGGGCAAATTGCAGAACAGGCTGGTCGTGGTCTGGTA AACATACCATTTGACGTATTGCAGGGTGGCGCAAGTCTGATTAATGCAATCAGTCAGGGGCTTGGTGGGCCAAAAGTATT GGATGATGTTTATCGTCCAGTAGACAGACCGACAGACCCCTACGCACAAGCAGGTGAAACAATTGGTGGGTATTTAGTTC CAGGAGTTGGAACGGCAGGAAGCATGGCTATTGGATCACTGGCAGAGGCCGCAAATCAGAAAGGCGATTTCGCACAAAAT GCAGCAAGAAATGCCGGAGTTAACCTTGCCGCTCAGGGTGTTCTTTCCGCAGCAGCAAAGGGAATAGGGCGTGGAATAAC GGCTATAAAAGGCGATATTGCGCCAGAAGTGGCGAAAAAAATTGCCACATCAGAATCGATGGGCGTGACACCTATGACAT CTGATGTCATCCCACCGAAAAATGCATTCACTCGTGGTCTTACTCAGGATGCTGAGGGGGCCATTCTTGGAACTGGCAGT AAAAGGGCAGAGCAATATGCAACGCGTAGTAAGTTGGTAAGTAATTATTTTGACCGTTTTGGTGAGTACAACCCTGATGA TGTGGTGAAATCTCTGACCACCACGTTAAGGGGACGGAAGGATTCTGCTGGCGCAGTTATCAATGACGTCACCAATAAAA TGGGTAATGCCGCAGTTGATACCACAAACACTATGAATGCTCTGAATACAGCGATCGCAAGACAGGAACGGCTTGGGACG TCTGCCAATCAAAGCCTGCTTACATCCTTGCGTAACCTACGTGAAGAATTAGCAAACCCTGCAACTGATTTGGATGTTAC GTTTGATCTCCTGCGTCAGCACAGAACGGCATTTAGATCTAATGTTCAGGGAGATGCTATGGTCTTCCCCAACCAGGCAA AAGCAGCTACCAATATGGTAGAGAATGCAATGTCAAAAGACCTTCGTAACGCAGTTGCTAAAAACCTCGGTGCTTCAGAC GCAGCAAAATACCTTAAAGCAAATTCCGATTATGCAAACGTTTATAATAAGGTGCTTAATAAAAACATTGCTAACAAGCT CAATAAGGCAAGTAGTGAAGCCAGCCCTGAACTTATAAATACCGTTGTATTAAGCAGAAAACCATCTGACGTGAAACGAA TCTGGATCGCATTGGATGATAAGGGGAAAGATGCTATGCGTGCAGCTTACGTCAGCAAAATAGCGGAAAAGGCCGGTGAC TCTCCAGCCAAGTTCATCACGGAAGTTAATAAGCTGAAATCTCAGTCAGGTGGTGAAATTTACAACACTATTTTTTCTGG AAAGCACATGAAAGAGCTTGATGCTCTTCATGAAGTTCTACAGCAAACAGCAAGGTCAGACACCGCAAATGTAGTAACTC AGACAGGGCAATCGCAAGCCAACCGGATAAGAACGATTGGCGCAACGGCAACTCTTGGCGTATCAATGGGGCTTGAGGCT GGTTTCGGTGCAATGATGCGCTTGTATGAGTCCAAAGCCGCACGGAATATGCTTCTTCGTTTGGCTAACACCAAAGCAGG AACACCAGCCTATGAAAGAGCGCTAAATAATGCTGCAAATGCGATACGCCCTATACTTTCAAGCCAAATTACAGCAGAAC AATAG
Upstream 100 bases:
>100_bases ATACTGACGCAGCGCCAGCACAAGATTCGACACCTTCAGGAGAACCACGGAATCAGGTTGGATCATATACCTCAAAATCA GGCATTCAATTTACGGTGGA
Downstream 100 bases:
>100_bases AATAAATAATTAACTAAGTACATAACTACTGACAGATAACCAACGCAACGACCCAGCTTCGGCTGGGTTTTTTTATGCCC AAATTTCACCGTGGCCACGC
Product: DNA transfer protein from phage
Products: NA
Alternate protein names: Injection Protein; DNA Transfer Protein Phage; DNA Transfer Protein Bacteriophage; APSE-2 Prophage
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MMKVTANGKTFTFPDGTSTEDIGTAIDEYFAGQAVQQQTVNQANNAPTQEEPSLMQQAGDWLTGGQSAGQIAEQAGRGLV NIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQN AARNAGVNLAAQGVLSAAAKGIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGAILGTGS KRAEQYATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDSAGAVINDVTNKMGNAAVDTTNTMNALNTAIARQERLGT SANQSLLTSLRNLREELANPATDLDVTFDLLRQHRTAFRSNVQGDAMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASD AAKYLKANSDYANVYNKVLNKNIANKLNKASSEASPELINTVVLSRKPSDVKRIWIALDDKGKDAMRAAYVSKIAEKAGD SPAKFITEVNKLKSQSGGEIYNTIFSGKHMKELDALHEVLQQTARSDTANVVTQTGQSQANRIRTIGATATLGVSMGLEA GFGAMMRLYESKAARNMLLRLANTKAGTPAYERALNNAANAIRPILSSQITAEQ
Sequences:
>Translated_614_residues MMKVTANGKTFTFPDGTSTEDIGTAIDEYFAGQAVQQQTVNQANNAPTQEEPSLMQQAGDWLTGGQSAGQIAEQAGRGLV NIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQN AARNAGVNLAAQGVLSAAAKGIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGAILGTGS KRAEQYATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDSAGAVINDVTNKMGNAAVDTTNTMNALNTAIARQERLGT SANQSLLTSLRNLREELANPATDLDVTFDLLRQHRTAFRSNVQGDAMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASD AAKYLKANSDYANVYNKVLNKNIANKLNKASSEASPELINTVVLSRKPSDVKRIWIALDDKGKDAMRAAYVSKIAEKAGD SPAKFITEVNKLKSQSGGEIYNTIFSGKHMKELDALHEVLQQTARSDTANVVTQTGQSQANRIRTIGATATLGVSMGLEA GFGAMMRLYESKAARNMLLRLANTKAGTPAYERALNNAANAIRPILSSQITAEQ >Mature_614_residues MMKVTANGKTFTFPDGTSTEDIGTAIDEYFAGQAVQQQTVNQANNAPTQEEPSLMQQAGDWLTGGQSAGQIAEQAGRGLV NIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQN AARNAGVNLAAQGVLSAAAKGIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGAILGTGS KRAEQYATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDSAGAVINDVTNKMGNAAVDTTNTMNALNTAIARQERLGT SANQSLLTSLRNLREELANPATDLDVTFDLLRQHRTAFRSNVQGDAMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASD AAKYLKANSDYANVYNKVLNKNIANKLNKASSEASPELINTVVLSRKPSDVKRIWIALDDKGKDAMRAAYVSKIAEKAGD SPAKFITEVNKLKSQSGGEIYNTIFSGKHMKELDALHEVLQQTARSDTANVVTQTGQSQANRIRTIGATATLGVSMGLEA GFGAMMRLYESKAARNMLLRLANTKAGTPAYERALNNAANAIRPILSSQITAEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64931; Mature: 64931
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKVTANGKTFTFPDGTSTEDIGTAIDEYFAGQAVQQQTVNQANNAPTQEEPSLMQQAGD CEEEECCCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHCCC WLTGGQSAGQIAEQAGRGLVNIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDP CCCCCCHHHHHHHHHCCCEEECCHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC YAQAGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQNAARNAGVNLAAQGVLSAAAK HHHCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHH GIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGAILGTGS HHHCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCH KRAEQYATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDSAGAVINDVTNKMGNAAVD HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC TTNTMNALNTAIARQERLGTSANQSLLTSLRNLREELANPATDLDVTFDLLRQHRTAFRS CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC NVQGDAMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASDAAKYLKANSDYANVYNKVLN CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH KNIANKLNKASSEASPELINTVVLSRKPSDVKRIWIALDDKGKDAMRAAYVSKIAEKAGD HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC SPAKFITEVNKLKSQSGGEIYNTIFSGKHMKELDALHEVLQQTARSDTANVVTQTGQSQA CHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHH NRIRTIGATATLGVSMGLEAGFGAMMRLYESKAARNMLLRLANTKAGTPAYERALNNAAN HHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AIRPILSSQITAEQ HHHHHHHHHCCCCC >Mature Secondary Structure MMKVTANGKTFTFPDGTSTEDIGTAIDEYFAGQAVQQQTVNQANNAPTQEEPSLMQQAGD CEEEECCCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHCCC WLTGGQSAGQIAEQAGRGLVNIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDP CCCCCCHHHHHHHHHCCCEEECCHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC YAQAGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQNAARNAGVNLAAQGVLSAAAK HHHCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHH GIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGAILGTGS HHHCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCH KRAEQYATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDSAGAVINDVTNKMGNAAVD HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC TTNTMNALNTAIARQERLGTSANQSLLTSLRNLREELANPATDLDVTFDLLRQHRTAFRS CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC NVQGDAMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASDAAKYLKANSDYANVYNKVLN CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH KNIANKLNKASSEASPELINTVVLSRKPSDVKRIWIALDDKGKDAMRAAYVSKIAEKAGD HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC SPAKFITEVNKLKSQSGGEIYNTIFSGKHMKELDALHEVLQQTARSDTANVVTQTGQSQA CHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHH NRIRTIGATATLGVSMGLEAGFGAMMRLYESKAARNMLLRLANTKAGTPAYERALNNAAN HHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AIRPILSSQITAEQ HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA