| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549367
Identifier: 218549367
GI number: 218549367
Start: 2086768
End: 2088180
Strand: Reverse
Name: 218549367
Synonym: EFER_2035
Alternate gene names: NA
Gene position: 2088180-2086768 (Counterclockwise)
Preceding gene: 218549368
Following gene: 218549366
Centisome position: 45.51
GC content: 50.04
Gene sequence:
>1413_bases TTGGCTACATGGCAACAGGCTGGTAATACAGGCGCGCTTCTTGCCGGGTTAGGCGGCATGAACTCCAACGCTCCAAGAGC AAGTGATGCAGACGCCACGCTTGCATACATTCGACAGAATAACGAGATGGAGCGTTCAGGACGTAATAACATCGGCCTTC AGGCGTTGCAGGGGCTGGGTAGTGTCGCTCAAACATATAAAGCCGCAAAGCAACAGGAAGCGGATGCTGCATTCCAAAAA GAATATGCGGCAGCCATCCAGTCAGGTGATCGACAGCAGGTGCGAGATCTGATGACCAAATATCCTGGTCAATTAGAGAA GATTCAGTCAGGCATGAAGTGGGCTGACGAAGACCAGCGCAGTTCTATCGGCACATTAGCGGCTGGCGCTCGCCTTGCGT CATCATCTCCAGAAGCGATGCAATCATGGCTGCAAAACAACGCCAAGGAACTGACTCGCGTCGGTGTTGACCCTAACAGC GTTGCTCAGATGTATCAGCAGAACCCTTCAGGATTTGGTGAGTTTGTTGATCACCTTGGGATGGCTGCTCTTGGTCCGAT TGATTACTTCAATGTTCAGGACAAGATGGTTGGTCGTGAGATTGACCGAGGCAGGCTGGCAGAGACAATCCGCAGCAATC AGGCTGGAGAAGCACTTCAGGCGAGAGGGCAAAACCTTTCCTATCAGTCAGCAATGACTGGGCACAATATCGCAGCACAG CGCTTGGCTCTGGATCAGCAAGAGTTCGGGTTTAAGATGCAGCAAGCGCAGGAAAAGGCTCAGCAGTTGATTAGCGAAGC ACCTAAGCTGTCAGTAAACATGGAAAAAGGCATCGAGACGGCTGTAAACAATGCTACAGCATCATCAAACTCAGCCAATT CTATGAGTGCGCTTGCTCAACAGTTCAGAGCAGAAAAACCAACGACAGGTTTGTTCGGTAACGCACAGAACATGTTCGCA AAACTTACCGGAAGCGATACAACATTGCGTGATTTGCGCATTCGCCAAAATGCCCTTGTTAACAGTCAGGTTCTTAAATT CCTACCTCCCGGCCCAGCAACGGATAAAGACGTTGAGATCGTTCGACAGGGTGCGCCAACTGACATGGATAACCCTGAGA CGGTCGCAAGATGGCTTGATGCAATGGCAAACCTTGAGCGACGAAACGCGCAGTTTAATGAGTTTAAAGCCGAGTGGATG AGCGCGAATGGCAACCCTGGACAATCGCGTAATGGCGGTCAGATATTGGGGTTGGATGTTAAAAAAGGTGAATCATTGGG GAGTGCCGTTAAGCGGTATATGTCAATGAATACTGACGCAGCGCCAGCACAAGATTCGACACCTTCAGGAGAACCACGGA ATCAGGTTGGATCATATACCTCAAAATCAGGCATTCAATTTACGGTGGAATGA
Upstream 100 bases:
>100_bases GGCAGGTGCAGCTGCAGGTACTGCAATCATGCCTGGTTGGGGTACAGCAATTGGTGCCGGCGTCGGTCTTCTTGGTTCAC TTTTTTAATGGAGGTGTCTC
Downstream 100 bases:
>100_bases TGAAAGTAACTGCAAACGGTAAGACATTTACCTTTCCTGATGGTACGAGCACCGAAGATATTGGCACCGCCATTGATGAG TATTTTGCTGGTCAGGCTGT
Product: DNA transfer protein gp20
Products: NA
Alternate protein names: DNA Transfer Protein Gp; Prophage DNA Injection Protein; APSE-2 Prophage; DNA Injection Protein
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MATWQQAGNTGALLAGLGGMNSNAPRASDADATLAYIRQNNEMERSGRNNIGLQALQGLGSVAQTYKAAKQQEADAAFQK EYAAAIQSGDRQQVRDLMTKYPGQLEKIQSGMKWADEDQRSSIGTLAAGARLASSSPEAMQSWLQNNAKELTRVGVDPNS VAQMYQQNPSGFGEFVDHLGMAALGPIDYFNVQDKMVGREIDRGRLAETIRSNQAGEALQARGQNLSYQSAMTGHNIAAQ RLALDQQEFGFKMQQAQEKAQQLISEAPKLSVNMEKGIETAVNNATASSNSANSMSALAQQFRAEKPTTGLFGNAQNMFA KLTGSDTTLRDLRIRQNALVNSQVLKFLPPGPATDKDVEIVRQGAPTDMDNPETVARWLDAMANLERRNAQFNEFKAEWM SANGNPGQSRNGGQILGLDVKKGESLGSAVKRYMSMNTDAAPAQDSTPSGEPRNQVGSYTSKSGIQFTVE
Sequences:
>Translated_470_residues MATWQQAGNTGALLAGLGGMNSNAPRASDADATLAYIRQNNEMERSGRNNIGLQALQGLGSVAQTYKAAKQQEADAAFQK EYAAAIQSGDRQQVRDLMTKYPGQLEKIQSGMKWADEDQRSSIGTLAAGARLASSSPEAMQSWLQNNAKELTRVGVDPNS VAQMYQQNPSGFGEFVDHLGMAALGPIDYFNVQDKMVGREIDRGRLAETIRSNQAGEALQARGQNLSYQSAMTGHNIAAQ RLALDQQEFGFKMQQAQEKAQQLISEAPKLSVNMEKGIETAVNNATASSNSANSMSALAQQFRAEKPTTGLFGNAQNMFA KLTGSDTTLRDLRIRQNALVNSQVLKFLPPGPATDKDVEIVRQGAPTDMDNPETVARWLDAMANLERRNAQFNEFKAEWM SANGNPGQSRNGGQILGLDVKKGESLGSAVKRYMSMNTDAAPAQDSTPSGEPRNQVGSYTSKSGIQFTVE >Mature_469_residues ATWQQAGNTGALLAGLGGMNSNAPRASDADATLAYIRQNNEMERSGRNNIGLQALQGLGSVAQTYKAAKQQEADAAFQKE YAAAIQSGDRQQVRDLMTKYPGQLEKIQSGMKWADEDQRSSIGTLAAGARLASSSPEAMQSWLQNNAKELTRVGVDPNSV AQMYQQNPSGFGEFVDHLGMAALGPIDYFNVQDKMVGREIDRGRLAETIRSNQAGEALQARGQNLSYQSAMTGHNIAAQR LALDQQEFGFKMQQAQEKAQQLISEAPKLSVNMEKGIETAVNNATASSNSANSMSALAQQFRAEKPTTGLFGNAQNMFAK LTGSDTTLRDLRIRQNALVNSQVLKFLPPGPATDKDVEIVRQGAPTDMDNPETVARWLDAMANLERRNAQFNEFKAEWMS ANGNPGQSRNGGQILGLDVKKGESLGSAVKRYMSMNTDAAPAQDSTPSGEPRNQVGSYTSKSGIQFTVE
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50785; Mature: 50654
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATWQQAGNTGALLAGLGGMNSNAPRASDADATLAYIRQNNEMERSGRNNIGLQALQGLG CCCCHHCCCCCCHHEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHH SVAQTYKAAKQQEADAAFQKEYAAAIQSGDRQQVRDLMTKYPGQLEKIQSGMKWADEDQR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHH SSIGTLAAGARLASSSPEAMQSWLQNNAKELTRVGVDPNSVAQMYQQNPSGFGEFVDHLG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHC MAALGPIDYFNVQDKMVGREIDRGRLAETIRSNQAGEALQARGQNLSYQSAMTGHNIAAQ HHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHCCCHHHHH RLALDQQEFGFKMQQAQEKAQQLISEAPKLSVNMEKGIETAVNNATASSNSANSMSALAQ HHHHCHHHHCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHH QFRAEKPTTGLFGNAQNMFAKLTGSDTTLRDLRIRQNALVNSQVLKFLPPGPATDKDVEI HHHCCCCCCCCCCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VRQGAPTDMDNPETVARWLDAMANLERRNAQFNEFKAEWMSANGNPGQSRNGGQILGLDV HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC KKGESLGSAVKRYMSMNTDAAPAQDSTPSGEPRNQVGSYTSKSGIQFTVE CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEC >Mature Secondary Structure ATWQQAGNTGALLAGLGGMNSNAPRASDADATLAYIRQNNEMERSGRNNIGLQALQGLG CCCHHCCCCCCHHEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHH SVAQTYKAAKQQEADAAFQKEYAAAIQSGDRQQVRDLMTKYPGQLEKIQSGMKWADEDQR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHH SSIGTLAAGARLASSSPEAMQSWLQNNAKELTRVGVDPNSVAQMYQQNPSGFGEFVDHLG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHC MAALGPIDYFNVQDKMVGREIDRGRLAETIRSNQAGEALQARGQNLSYQSAMTGHNIAAQ HHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHCCCHHHHH RLALDQQEFGFKMQQAQEKAQQLISEAPKLSVNMEKGIETAVNNATASSNSANSMSALAQ HHHHCHHHHCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHH QFRAEKPTTGLFGNAQNMFAKLTGSDTTLRDLRIRQNALVNSQVLKFLPPGPATDKDVEI HHHCCCCCCCCCCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VRQGAPTDMDNPETVARWLDAMANLERRNAQFNEFKAEWMSANGNPGQSRNGGQILGLDV HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC KKGESLGSAVKRYMSMNTDAAPAQDSTPSGEPRNQVGSYTSKSGIQFTVE CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA