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The map label for this gene is ydeI [H]

Identifier: 218548894

GI number: 218548894

Start: 1573211

End: 1573603

Strand: Direct

Name: ydeI [H]

Synonym: EFER_1539

Alternate gene names: 218548894

Gene position: 1573211-1573603 (Clockwise)

Preceding gene: 218548892

Following gene: 218548895

Centisome position: 34.28

GC content: 43.0

Gene sequence:

>393_bases
ATGAAATTTAAGGCCTTAGCAGTTATAAGCTTTCTGGTTATGCCCTATGCGTTTGCTGCTGATGAAGGTGGTTTAAAACA
GGACGCAGCGCCGCCGCCCCCACACGCGATTGAAGATGGTTATCGTGGTACTGATGATGCAAAAAAAATGACTGTTGATT
TTGCAAAGTCTATGCATGATGGTGCGACGGTTTCATTACGCGGTAATCTGATTTCTCAAAAAGGGGAAGATAACTATCTC
TTTCGCGATAAATCAGGAGAAATAAATGTGATTATTCCGGCAACTGTTTTCGATGGACGAGAAGTTCAGCCAGATCAGAT
GATTAATATCAGCGGTAGTCTGGACAAGAAATCGAGTCCACCGGTCGTCCGCGTTCATCATCTACAAAAATAA

Upstream 100 bases:

>100_bases
GAGTTTGCTGATTGTTCCGAAATAGCGCCCGTCATGGTTGTAAAAATGATGAGTACCAACCAGGCTTAATCACACTTAGT
AAAATATCCAGGGGGAAATA

Downstream 100 bases:

>100_bases
AACACCAGCCAATTACCGGATGGTTAACGCTATCCGGTAATACCCCATGCATATTTCAATGAGTTAATTTGCTCAGTTTA
TTAAATATCTTAACTATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKFKALAVISFLVMPYAFAADEGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKSMHDGATVSLRGNLISQKGEDNYL
FRDKSGEINVIIPATVFDGREVQPDQMINISGSLDKKSSPPVVRVHHLQK

Sequences:

>Translated_130_residues
MKFKALAVISFLVMPYAFAADEGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKSMHDGATVSLRGNLISQKGEDNYL
FRDKSGEINVIIPATVFDGREVQPDQMINISGSLDKKSSPPVVRVHHLQK
>Mature_130_residues
MKFKALAVISFLVMPYAFAADEGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKSMHDGATVSLRGNLISQKGEDNYL
FRDKSGEINVIIPATVFDGREVQPDQMINISGSLDKKSSPPVVRVHHLQK

Specific function: Unknown

COG id: COG3111

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787817, Length=130, Percent_Identity=86.1538461538462, Blast_Score=236, Evalue=4e-64,
Organism=Escherichia coli, GI1789401, Length=129, Percent_Identity=31.7829457364341, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016052
- InterPro:   IPR005220 [H]

Pfam domain/function: PF04076 BOF [H]

EC number: NA

Molecular weight: Translated: 14197; Mature: 14197

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKALAVISFLVMPYAFAADEGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKSMHD
CCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
GATVSLRGNLISQKGEDNYLFRDKSGEINVIIPATVFDGREVQPDQMINISGSLDKKSSP
CCEEEEECCEECCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCC
PVVRVHHLQK
CEEEEEECCC
>Mature Secondary Structure
MKFKALAVISFLVMPYAFAADEGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKSMHD
CCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
GATVSLRGNLISQKGEDNYLFRDKSGEINVIIPATVFDGREVQPDQMINISGSLDKKSSP
CCEEEEECCEECCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCC
PVVRVHHLQK
CEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383113; 9097039; 9278503 [H]