| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218548176
Identifier: 218548176
GI number: 218548176
Start: 812457
End: 812930
Strand: Direct
Name: 218548176
Synonym: EFER_0793
Alternate gene names: NA
Gene position: 812457-812930 (Clockwise)
Preceding gene: 218548174
Following gene: 218548177
Centisome position: 17.71
GC content: 49.58
Gene sequence:
>474_bases ATGAGTTCAGTCAAAAAAACAGCGGATGTACAGAGTGCAGATGCGGCTTTTCATCGTGAAGAGTTCCCGTTTTACTGGAT TGTTAACGTCTACGCGCGTTACACCCAGGTGATGGAAGTGACGTTGAAAAAGGTGCAGCTCGACGTTTCTCGCTTTCGGG TGATGATGATTACCCATCAGTACGGTAAGGCCAGCATTTCGCAAATTTCGGAATATGCGATGGCGAAAATGCCGACCGTC ACCAAAATCGTTGGTCGTCTGCGCGATGACGGCATGGTGACAACCGCCAGCAGCGAACAGGATGCCCGTGTTACCGAAGT GATGCTTACCCCAGCCGGAAAAGAAAAAATCGAAGAAGCGCACCGCCTGGCACAGAAAGTTTTCGAAAAAGGGTTCAAGG GGATGACGTCTGCACAGGTGGAAAAAATGAATCTGTCGCTGTCGAAAGTGCTCGGTAACCTCAACGAACTGTAA
Upstream 100 bases:
>100_bases TGAGATTCATTGATGGCACAAGGTCGTTGTAATGATGCTATAGCGCACACTTATAACCCGGTATACTCAGCGTATTGACG TCTATTTCTCCAGGAAGCCC
Downstream 100 bases:
>100_bases CCTCAGAGAGCGATCATCAAGATTTGTGATCGTGCTAAACTTTTCTTATAACTTGCTGTTAATACTATAGTTAATTCTTA TGTGTTGTCCTGGGTTTTCA
Product: transcriptional repressor of for multidrug resistance pump (MarR family)
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Repressor MprA; Transcriptional Regulator MarR; Transcriptional Repressor Of For Multidrug Resistance Pump
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSSVKKTADVQSADAAFHREEFPFYWIVNVYARYTQVMEVTLKKVQLDVSRFRVMMITHQYGKASISQISEYAMAKMPTV TKIVGRLRDDGMVTTASSEQDARVTEVMLTPAGKEKIEEAHRLAQKVFEKGFKGMTSAQVEKMNLSLSKVLGNLNEL
Sequences:
>Translated_157_residues MSSVKKTADVQSADAAFHREEFPFYWIVNVYARYTQVMEVTLKKVQLDVSRFRVMMITHQYGKASISQISEYAMAKMPTV TKIVGRLRDDGMVTTASSEQDARVTEVMLTPAGKEKIEEAHRLAQKVFEKGFKGMTSAQVEKMNLSLSKVLGNLNEL >Mature_156_residues SSVKKTADVQSADAAFHREEFPFYWIVNVYARYTQVMEVTLKKVQLDVSRFRVMMITHQYGKASISQISEYAMAKMPTVT KIVGRLRDDGMVTTASSEQDARVTEVMLTPAGKEKIEEAHRLAQKVFEKGFKGMTSAQVEKMNLSLSKVLGNLNEL
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17731; Mature: 17600
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVKKTADVQSADAAFHREEFPFYWIVNVYARYTQVMEVTLKKVQLDVSRFRVMMITHQ CCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YGKASISQISEYAMAKMPTVTKIVGRLRDDGMVTTASSEQDARVTEVMLTPAGKEKIEEA CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHEECCCCHHHHHHH HRLAQKVFEKGFKGMTSAQVEKMNLSLSKVLGNLNEL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSVKKTADVQSADAAFHREEFPFYWIVNVYARYTQVMEVTLKKVQLDVSRFRVMMITHQ CCCHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YGKASISQISEYAMAKMPTVTKIVGRLRDDGMVTTASSEQDARVTEVMLTPAGKEKIEEA CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHEECCCCHHHHHHH HRLAQKVFEKGFKGMTSAQVEKMNLSLSKVLGNLNEL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA