| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is yfdY [H]
Identifier: 218548174
GI number: 218548174
Start: 810411
End: 810659
Strand: Direct
Name: yfdY [H]
Synonym: EFER_0791
Alternate gene names: 218548174
Gene position: 810411-810659 (Clockwise)
Preceding gene: 218548172
Following gene: 218548176
Centisome position: 17.66
GC content: 45.38
Gene sequence:
>249_bases ATGGCTATGATCTATATCTGGGCTTTTCTGGTGGTCAGTATCTTATGTGTCAGCGGCTATATAGGCCAGGTACTGGGATG GGCTTCAGCAATCAGTTCACTCATCGGGATGATTATTCTCACTGCGATGATTTATTATTTCACTTCCTGGGTTACCGGCG GAAATGAAATTGTCACTGGCATTTTCTTGTTTCTGGCCCCAGCATGTGGGTTGATGATTCGGTTTATGGTCGGCTACGGT AGACGTTAA
Upstream 100 bases:
>100_bases ATGACAGCGATATCTAAATTGCTGCGATTTGAGATATGTCTTAGACTGAAATGAGTAGGAAAGGTAACAGCTTACGTGAA TCTTAGTTCGGACAGGAGGG
Downstream 100 bases:
>100_bases TGCCAGAGCGACGGCATTGTTACTTGTGCCTGTTATGTTAATCGTAATTTATTGAAATGCCGGATAAGACATTAACGCCG TATCCGGCAAGAAGAAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MAMIYIWAFLVVSILCVSGYIGQVLGWASAISSLIGMIILTAMIYYFTSWVTGGNEIVTGIFLFLAPACGLMIRFMVGYG RR
Sequences:
>Translated_82_residues MAMIYIWAFLVVSILCVSGYIGQVLGWASAISSLIGMIILTAMIYYFTSWVTGGNEIVTGIFLFLAPACGLMIRFMVGYG RR >Mature_81_residues AMIYIWAFLVVSILCVSGYIGQVLGWASAISSLIGMIILTAMIYYFTSWVTGGNEIVTGIFLFLAPACGLMIRFMVGYGR R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788720, Length=80, Percent_Identity=75, Blast_Score=123, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9011; Mature: 8880
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMIYIWAFLVVSILCVSGYIGQVLGWASAISSLIGMIILTAMIYYFTSWVTGGNEIVTG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH IFLFLAPACGLMIRFMVGYGRR HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AMIYIWAFLVVSILCVSGYIGQVLGWASAISSLIGMIILTAMIYYFTSWVTGGNEIVTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH IFLFLAPACGLMIRFMVGYGRR HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]