Definition Escherichia fergusonii ATCC 35469 chromosome, complete genome.
Accession NC_011740
Length 4,588,711

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The map label for this gene is yfdY [H]

Identifier: 218548174

GI number: 218548174

Start: 810411

End: 810659

Strand: Direct

Name: yfdY [H]

Synonym: EFER_0791

Alternate gene names: 218548174

Gene position: 810411-810659 (Clockwise)

Preceding gene: 218548172

Following gene: 218548176

Centisome position: 17.66

GC content: 45.38

Gene sequence:

>249_bases
ATGGCTATGATCTATATCTGGGCTTTTCTGGTGGTCAGTATCTTATGTGTCAGCGGCTATATAGGCCAGGTACTGGGATG
GGCTTCAGCAATCAGTTCACTCATCGGGATGATTATTCTCACTGCGATGATTTATTATTTCACTTCCTGGGTTACCGGCG
GAAATGAAATTGTCACTGGCATTTTCTTGTTTCTGGCCCCAGCATGTGGGTTGATGATTCGGTTTATGGTCGGCTACGGT
AGACGTTAA

Upstream 100 bases:

>100_bases
ATGACAGCGATATCTAAATTGCTGCGATTTGAGATATGTCTTAGACTGAAATGAGTAGGAAAGGTAACAGCTTACGTGAA
TCTTAGTTCGGACAGGAGGG

Downstream 100 bases:

>100_bases
TGCCAGAGCGACGGCATTGTTACTTGTGCCTGTTATGTTAATCGTAATTTATTGAAATGCCGGATAAGACATTAACGCCG
TATCCGGCAAGAAGAAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MAMIYIWAFLVVSILCVSGYIGQVLGWASAISSLIGMIILTAMIYYFTSWVTGGNEIVTGIFLFLAPACGLMIRFMVGYG
RR

Sequences:

>Translated_82_residues
MAMIYIWAFLVVSILCVSGYIGQVLGWASAISSLIGMIILTAMIYYFTSWVTGGNEIVTGIFLFLAPACGLMIRFMVGYG
RR
>Mature_81_residues
AMIYIWAFLVVSILCVSGYIGQVLGWASAISSLIGMIILTAMIYYFTSWVTGGNEIVTGIFLFLAPACGLMIRFMVGYGR
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788720, Length=80, Percent_Identity=75, Blast_Score=123, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9011; Mature: 8880

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMIYIWAFLVVSILCVSGYIGQVLGWASAISSLIGMIILTAMIYYFTSWVTGGNEIVTG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IFLFLAPACGLMIRFMVGYGRR
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AMIYIWAFLVVSILCVSGYIGQVLGWASAISSLIGMIILTAMIYYFTSWVTGGNEIVTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IFLFLAPACGLMIRFMVGYGRR
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]