| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218548014
Identifier: 218548014
GI number: 218548014
Start: 622487
End: 623035
Strand: Direct
Name: 218548014
Synonym: EFER_0620
Alternate gene names: NA
Gene position: 622487-623035 (Clockwise)
Preceding gene: 218548013
Following gene: 218548015
Centisome position: 13.57
GC content: 57.38
Gene sequence:
>549_bases ATGAGGACGATTGAAGCCATGCAGCGACAACTCCTCGGTCTGATTGGGCGGGCAGTGGTGAAAAGCATCAGTGCCGCCAC GAAATGTCAGACCGTGGATGTGTCCCTGATTGCTGGTGAACCCAAAGCAGGGGTTGAACATCTTGAACCCTACGGTTTTA CCGCAAGGGCAAACAGCGGTGCGGAAGCGGTGGTGTTGTTTCCGGATGGCGACCGTTCTCATGCGGTGGTTGTTACGGTG TCGGACCGGCGCTACCGCCTGAAAGGGCTGCAGACGGGGGAGGTGGCTGTCTATGATGATCAAGGGCAGTCCGTGACGCT GACCCGGGCGGGGATCGTGGTGGACGGTGCAGGTAAAACGATCACGTTTCGCAATGCGCCTAAGGCTCGTTTTGAAATGG ACCTGGAAGTGACCGGACAGGTGAAAGACCTGTGCGACTCCACCGGCACCACCATGTCAGCGATGCGGCTTGCCTATAAC GGGCATCGTCACAGAGAGAACGGTCAGGGCAGTAACACCGACAAACCTGATAAAGCGATGGAGGCATGA
Upstream 100 bases:
>100_bases CGGAAATCCGTGTCGGCCCGCCTGATGCTTATCTGCCTGAACCCGAAGACCCCGGCGCGCGGAAAAAGAAAAAAGCCAGA GTACAGGAGGACCCGTTCTG
Downstream 100 bases:
>100_bases TGGAACTGTGGCTGACGGTGAACGGTAAACGCACCTGCGCCAGCGCACCGCTGGATCCGCTGACCCGTGCCGTGGTGATT TCCCTGTTCACCTGGCGGCG
Product: baseplate assembly phage protein
Products: NA
Alternate protein names: Phage Baseplate Assembly Protein; Bacteriophage Mu; Phage Assembly Protein; Baseplate Assembly Protein; Prophage MuSo2 Baseplate Assembly Protein V; Mu-Like Phage Assembly Protein Gp; Bacteriophage Protein; Phage-Related Baseplate Assembly Protein V; Phage Base Plate Protein; Baseplate Assembly Mu-Like; Baseplate Assembly Phage Protein; Mu-Like Prophage Protein Gp
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRTIEAMQRQLLGLIGRAVVKSISAATKCQTVDVSLIAGEPKAGVEHLEPYGFTARANSGAEAVVLFPDGDRSHAVVVTV SDRRYRLKGLQTGEVAVYDDQGQSVTLTRAGIVVDGAGKTITFRNAPKARFEMDLEVTGQVKDLCDSTGTTMSAMRLAYN GHRHRENGQGSNTDKPDKAMEA
Sequences:
>Translated_182_residues MRTIEAMQRQLLGLIGRAVVKSISAATKCQTVDVSLIAGEPKAGVEHLEPYGFTARANSGAEAVVLFPDGDRSHAVVVTV SDRRYRLKGLQTGEVAVYDDQGQSVTLTRAGIVVDGAGKTITFRNAPKARFEMDLEVTGQVKDLCDSTGTTMSAMRLAYN GHRHRENGQGSNTDKPDKAMEA >Mature_182_residues MRTIEAMQRQLLGLIGRAVVKSISAATKCQTVDVSLIAGEPKAGVEHLEPYGFTARANSGAEAVVLFPDGDRSHAVVVTV SDRRYRLKGLQTGEVAVYDDQGQSVTLTRAGIVVDGAGKTITFRNAPKARFEMDLEVTGQVKDLCDSTGTTMSAMRLAYN GHRHRENGQGSNTDKPDKAMEA
Specific function: Unknown
COG id: COG4384
COG function: function code S; Mu-like prophage protein gp45
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19552; Mature: 19552
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIEAMQRQLLGLIGRAVVKSISAATKCQTVDVSLIAGEPKAGVEHLEPYGFTARANSG CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCHHHCCCCCEEEECCCC AEAVVLFPDGDRSHAVVVTVSDRRYRLKGLQTGEVAVYDDQGQSVTLTRAGIVVDGAGKT CCEEEEEECCCCCCEEEEEECCCEEEECCCCCCCEEEECCCCCEEEEEECCEEEECCCCE ITFRNAPKARFEMDLEVTGQVKDLCDSTGTTMSAMRLAYNGHRHRENGQGSNTDKPDKAM EEECCCCCCEEEEEEEECCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHC EA CC >Mature Secondary Structure MRTIEAMQRQLLGLIGRAVVKSISAATKCQTVDVSLIAGEPKAGVEHLEPYGFTARANSG CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCHHHCCCCCEEEECCCC AEAVVLFPDGDRSHAVVVTVSDRRYRLKGLQTGEVAVYDDQGQSVTLTRAGIVVDGAGKT CCEEEEEECCCCCCEEEEEECCCEEEECCCCCCCEEEECCCCCEEEEEECCEEEECCCCE ITFRNAPKARFEMDLEVTGQVKDLCDSTGTTMSAMRLAYNGHRHRENGQGSNTDKPDKAM EEECCCCCCEEEEEEEECCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHC EA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA