| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218548013
Identifier: 218548013
GI number: 218548013
Start: 621408
End: 622487
Strand: Direct
Name: 218548013
Synonym: EFER_0619
Alternate gene names: NA
Gene position: 621408-622487 (Clockwise)
Preceding gene: 218548012
Following gene: 218548014
Centisome position: 13.54
GC content: 58.98
Gene sequence:
>1080_bases ATGAACGACAATGTCACGCTACGGGTAAATGGCCGGGAGTGGAATGGCTGGACATCGGTGCGCATCGGTGCCGGTATTGA ACGGCTGGCGCGGGATTTCAGTGTGGAGATCACCCGCCAGTGGCCGGGAGATGAGGGTATCACCACGCTTCATCCGCGCA TTAAAAACGGTTCAAAAGTGGAGGTGCTGATTGGTGATGAGCTGGTGATCACTGGCTGGGTGGAGGCGACGCCCGTTCGT TACGATGCCCGTTCGGTCAGCACCGGTATTGCCGGACGCAGTCTGACCGCTGACCTGATTGACTGTGCAGCCGAACCGAC ACAGTTTAACGGACGATCGCTGGTACAGATTGCGCAGGCGCTTGCTGCGCCTTTCGGCATTGAGGTGGTGAACAACGGTG CGCCGTCGGGTGTTATTCCTGACGTCCAGCCTGATCACGGCGAAACGGTGATTGAGGTGATCAACAAAATACTCGGTCAG CAGCAGGCACTGGCTTACGACGACCCGCACGGCAGGCTGGTGATTGGCGGTATTGGCTCAACGCGGGCACATACCGCGCT GGTACTCGGGGAAAACATCCTTTCCTGCGATACGGAGAAGAGTATCCGGGAGCGGTTTTCAGTTTACCAGGTGGCGGGGC AGCGTGCCGGAAACGACGATGATTTCGGTGAGGCCACCACCACCGCGCTGCGGGCCCGCACAGAGGACGCATTTATTGCC CGTTACCGTCCGATGTATATCAGGCAGACAGGGCAGGCTACGGGGGCAGGCTGTATTGCCCGTGCTGACTTTGAAGCCCG ACAACGGGCGGCGCGGACGGACGAAACCACCTATGTGGTGCAGGGCTGGCGACAGGGTAACGGTACGCTGTGGCAGCCCA ACCAGCGGGTGATTGTCTTCGATCCGGTCTGTGGTTTCGACAATACCGAACTGCTTGTCTCGGAAGTCACGTTTACTCAG GACCAGAACGGCACCCTGACGGAAATCCGTGTCGGCCCGCCTGATGCTTATCTGCCTGAACCCGAAGACCCCGGCGCGCG GAAAAAGAAAAAAGCCAGAGTACAGGAGGACCCGTTCTGA
Upstream 100 bases:
>100_bases CCTGGTTTGATAACGCGGCGCGTGATGCGGACATTATCCGGCGTAATGCCATTACGCATCCCGGCTTTGTGCCGGTGATC CCTCTGAAGGTACCAGTGCA
Downstream 100 bases:
>100_bases TGAGGACGATTGAAGCCATGCAGCGACAACTCCTCGGTCTGATTGGGCGGGCAGTGGTGAAAAGCATCAGTGCCGCCACG AAATGTCAGACCGTGGATGT
Product: Tail protein
Products: NA
Alternate protein names: Mu P Family Protein; Bacteriophage Tail Protein; Bacteriophage Mu P Protein; Phage Tail Protein; Bacteriophage Mu P; Bacteriophage Mu P Family Protein; Mu-Like Prophage Tail Protein GpP; Bacteriophage Related Protein; Mu-Like Prophage Tail Protein; Prophage; Mu-Like Phage Tail Protein GpP; Bacteriophage V Tail Protein; Mu Bacteriophage Tail Protein P; Mu-Like Phage P Protein; Bacteriophage Tail Protein GpP Mu-Like; Phage Baseplate Protein
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MNDNVTLRVNGREWNGWTSVRIGAGIERLARDFSVEITRQWPGDEGITTLHPRIKNGSKVEVLIGDELVITGWVEATPVR YDARSVSTGIAGRSLTADLIDCAAEPTQFNGRSLVQIAQALAAPFGIEVVNNGAPSGVIPDVQPDHGETVIEVINKILGQ QQALAYDDPHGRLVIGGIGSTRAHTALVLGENILSCDTEKSIRERFSVYQVAGQRAGNDDDFGEATTTALRARTEDAFIA RYRPMYIRQTGQATGAGCIARADFEARQRAARTDETTYVVQGWRQGNGTLWQPNQRVIVFDPVCGFDNTELLVSEVTFTQ DQNGTLTEIRVGPPDAYLPEPEDPGARKKKKARVQEDPF
Sequences:
>Translated_359_residues MNDNVTLRVNGREWNGWTSVRIGAGIERLARDFSVEITRQWPGDEGITTLHPRIKNGSKVEVLIGDELVITGWVEATPVR YDARSVSTGIAGRSLTADLIDCAAEPTQFNGRSLVQIAQALAAPFGIEVVNNGAPSGVIPDVQPDHGETVIEVINKILGQ QQALAYDDPHGRLVIGGIGSTRAHTALVLGENILSCDTEKSIRERFSVYQVAGQRAGNDDDFGEATTTALRARTEDAFIA RYRPMYIRQTGQATGAGCIARADFEARQRAARTDETTYVVQGWRQGNGTLWQPNQRVIVFDPVCGFDNTELLVSEVTFTQ DQNGTLTEIRVGPPDAYLPEPEDPGARKKKKARVQEDPF >Mature_359_residues MNDNVTLRVNGREWNGWTSVRIGAGIERLARDFSVEITRQWPGDEGITTLHPRIKNGSKVEVLIGDELVITGWVEATPVR YDARSVSTGIAGRSLTADLIDCAAEPTQFNGRSLVQIAQALAAPFGIEVVNNGAPSGVIPDVQPDHGETVIEVINKILGQ QQALAYDDPHGRLVIGGIGSTRAHTALVLGENILSCDTEKSIRERFSVYQVAGQRAGNDDDFGEATTTALRARTEDAFIA RYRPMYIRQTGQATGAGCIARADFEARQRAARTDETTYVVQGWRQGNGTLWQPNQRVIVFDPVCGFDNTELLVSEVTFTQ DQNGTLTEIRVGPPDAYLPEPEDPGARKKKKARVQEDPF
Specific function: Unknown
COG id: COG4379
COG function: function code R; Mu-like prophage tail protein gpP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39258; Mature: 39258
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDNVTLRVNGREWNGWTSVRIGAGIERLARDFSVEITRQWPGDEGITTLHPRIKNGSKV CCCCEEEEECCCEECCEEEEEECCCHHHHHHCCEEEEEEECCCCCCCEEECCCCCCCCEE EVLIGDELVITGWVEATPVRYDARSVSTGIAGRSLTADLIDCAAEPTQFNGRSLVQIAQA EEEECCEEEEEEEEECCCEEECCHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH LAAPFGIEVVNNGAPSGVIPDVQPDHGETVIEVINKILGQQQALAYDDPHGRLVIGGIGS HCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCC TRAHTALVLGENILSCDTEKSIRERFSVYQVAGQRAGNDDDFGEATTTALRARTEDAFIA CCCEEEEEECCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHH RYRPMYIRQTGQATGAGCIARADFEARQRAARTDETTYVVQGWRQGNGTLWQPNQRVIVF HCCCEEEEECCCCCCCCEEEECCHHHHHHHHCCCCCEEEEEEEECCCCCEECCCCEEEEE DPVCGFDNTELLVSEVTFTQDQNGTLTEIRVGPPDAYLPEPEDPGARKKKKARVQEDPF CCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure MNDNVTLRVNGREWNGWTSVRIGAGIERLARDFSVEITRQWPGDEGITTLHPRIKNGSKV CCCCEEEEECCCEECCEEEEEECCCHHHHHHCCEEEEEEECCCCCCCEEECCCCCCCCEE EVLIGDELVITGWVEATPVRYDARSVSTGIAGRSLTADLIDCAAEPTQFNGRSLVQIAQA EEEECCEEEEEEEEECCCEEECCHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH LAAPFGIEVVNNGAPSGVIPDVQPDHGETVIEVINKILGQQQALAYDDPHGRLVIGGIGS HCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCC TRAHTALVLGENILSCDTEKSIRERFSVYQVAGQRAGNDDDFGEATTTALRARTEDAFIA CCCEEEEEECCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHH RYRPMYIRQTGQATGAGCIARADFEARQRAARTDETTYVVQGWRQGNGTLWQPNQRVIVF HCCCEEEEECCCCCCCCEEEECCHHHHHHHHCCCCCEEEEEEEECCCCCEECCCCEEEEE DPVCGFDNTELLVSEVTFTQDQNGTLTEIRVGPPDAYLPEPEDPGARKKKKARVQEDPF CCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA