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The map label for this gene is ybaT [H]

Identifier: 218547937

GI number: 218547937

Start: 541389

End: 542678

Strand: Direct

Name: ybaT [H]

Synonym: EFER_0540

Alternate gene names: 218547937

Gene position: 541389-542678 (Clockwise)

Preceding gene: 218547935

Following gene: 218547938

Centisome position: 11.8

GC content: 51.24

Gene sequence:

>1290_bases
ATGAGCACGGAAAGAAATAACACAGGTAAAACTCTCGGTTTGTGGAATGTCGTTTCCATTGGTATTGGGGCGATGGTGGG
GGCGGGGATCTTTGCGTTGTTGGGACAAGCAGCGTTGTTGATGGAAGCCTCAACATGGGTTGCGTTTGCCTTCGGCGGTA
TCGTGGCAATGTTTTCCGGCTACGCCTATGCCCGGCTTGGGGCGAGCTATCCCAGTAACGGCGGTATTATCGATTTTTTT
CGCAGAGGATTAGGCAACGGTGTCTTTTCGCTGGCGCTCTCGTTGCTTTATCTGATGACACTGGCTGTCAGTATCGCCAT
GGTTGCCAGAGCATTCGGGGCTTACGCTGCGCAACTCCTGCATGAAGGAAGCCAGGATGAGCATCTGATTCTGCTTTATG
CACTGGCGATTATCGCGCTGATGACGCTTTTCAACTCTTTAAGCAACCATGCGGTTGGTCGGCTGGAAGTGATCCTCGTT
GGTATCAAAATGATGATCCTGCTGCTGTTGATCATTGCGGGCGTCTGGTCGCTGCAACCTGCGCATATTTCCGTTTCCGC
GCCTCCCAGTTCCGGCGCGTTCTTTTCCTGTATCGGGATTACCTTCCTCGCCTATGCAGGTTTTGGCATGATGGCGAACG
CGGCAGATAAAGTGAAAGATCCGGCGGTCATTATGCCGCGAGCATTTTTACTGGCGATAGGCGTTACCACCTTGCTCTAT
ATTTCCCTGGCACTGGTACTACTTAGCGACGTTTCAGCTCTGGAACTGGAAAAATATGCTGATACTGCCGTAGCGCAAGC
AGCTTCACCGCTTCTCGGACACGTGGGTTATGTGATTGTGGTCATTGGCGCCTTGTTAGCAACGGCATCCGCCATTAACG
CCAACCTGTTTGCCGTGTTCAATATCATGGATAACATGGGTAGCGAGCGCGAACTGCCAAAAATTTTCAATAAATCGCTG
TGGCGGCAGAGTACCTGGGGCAACATCATCGTGGTGGTGTTGATCATGCTGATGACGGCAGCGCTTAACCTGGGTTCACT
GGCCAGTGTCGCCAGTGCCACCTTTTTGATCTGCTACCTCGCCGTTTTCGTTGTGGCAATCCGTCTGCGTCATGATATCC
ACGCCTCGTTGCCAATTCTTCTCGTTGGTATGCTGGTCATGCTGCTGGTGATTATTGGCTTTATCTACAGTTTGTGGTCT
CAGGGGAGTAGCGCGCTGATGTGGATTATTGGCGCACTGTTACTGAGTATGATCGTGGCTATGGTAATGAAACGTAATAA
AACAGACTGA

Upstream 100 bases:

>100_bases
TGCCTGTCACTGGCAGTACAGATAGTCGGATACTCAGGCAATTATTGGTGGCATCGGTCGCTAAACAGCCAGGTGGTAAC
TTGTTTAAGGACTGAAGACG

Downstream 100 bases:

>100_bases
ACCCTTCCTTCGCGCAGTGTAAAATGCACTGCGCTCTACTATTTCCCTGCTTTAATTAAAAATCTCTTTCTTTATAACGT
TAATAAATAAGTCACAATTA

Product: nitrogen-containing metabolite transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MSTERNNTGKTLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFF
RRGLGNGVFSLALSLLYLMTLAVSIAMVARAFGAYAAQLLHEGSQDEHLILLYALAIIALMTLFNSLSNHAVGRLEVILV
GIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPAVIMPRAFLLAIGVTTLLY
ISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKIFNKSL
WRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILLVGMLVMLLVIIGFIYSLWS
QGSSALMWIIGALLLSMIVAMVMKRNKTD

Sequences:

>Translated_429_residues
MSTERNNTGKTLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFF
RRGLGNGVFSLALSLLYLMTLAVSIAMVARAFGAYAAQLLHEGSQDEHLILLYALAIIALMTLFNSLSNHAVGRLEVILV
GIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPAVIMPRAFLLAIGVTTLLY
ISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKIFNKSL
WRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILLVGMLVMLLVIIGFIYSLWS
QGSSALMWIIGALLLSMIVAMVMKRNKTD
>Mature_428_residues
STERNNTGKTLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFFR
RGLGNGVFSLALSLLYLMTLAVSIAMVARAFGAYAAQLLHEGSQDEHLILLYALAIIALMTLFNSLSNHAVGRLEVILVG
IKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPAVIMPRAFLLAIGVTTLLYI
SLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKIFNKSLW
RQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILLVGMLVMLLVIIGFIYSLWSQ
GSSALMWIIGALLLSMIVAMVMKRNKTD

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786694, Length=428, Percent_Identity=94.8598130841121, Blast_Score=773, Evalue=0.0,
Organism=Drosophila melanogaster, GI221331183, Length=303, Percent_Identity=25.0825082508251, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17647653, Length=303, Percent_Identity=25.0825082508251, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24664379, Length=303, Percent_Identity=25.0825082508251, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45550968, Length=401, Percent_Identity=22.9426433915212, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI19921172, Length=401, Percent_Identity=22.9426433915212, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24666159, Length=410, Percent_Identity=21.9512195121951, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24667468, Length=408, Percent_Identity=25.4901960784314, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI221512776, Length=410, Percent_Identity=21.9512195121951, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 45545; Mature: 45414

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTERNNTGKTLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLMTLAVSIAMVARAFGAYAAQLL
HHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEGSQDEHLILLYALAIIALMTLFNSLSNHAVGRLEVILVGIKMMILLLLIIAGVWSLQP
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPAVIMPRAFLLAIGVTTLLY
CEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHH
ISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAVF
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
NIMDNMGSERELPKIFNKSLWRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICYL
HHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AVFVVAIRLRHDIHASLPILLVGMLVMLLVIIGFIYSLWSQGSSALMWIIGALLLSMIVA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MVMKRNKTD
HHHHCCCCC
>Mature Secondary Structure 
STERNNTGKTLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLMTLAVSIAMVARAFGAYAAQLL
HHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEGSQDEHLILLYALAIIALMTLFNSLSNHAVGRLEVILVGIKMMILLLLIIAGVWSLQP
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPAVIMPRAFLLAIGVTTLLY
CEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHH
ISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAVF
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
NIMDNMGSERELPKIFNKSLWRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICYL
HHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AVFVVAIRLRHDIHASLPILLVGMLVMLLVIIGFIYSLWSQGSSALMWIIGALLLSMIVA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MVMKRNKTD
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]