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The map label for this gene is yfjD [H]

Identifier: 218547869

GI number: 218547869

Start: 465281

End: 466477

Strand: Reverse

Name: yfjD [H]

Synonym: EFER_0460

Alternate gene names: 218547869

Gene position: 466477-465281 (Counterclockwise)

Preceding gene: 218547870

Following gene: 218547867

Centisome position: 10.17

GC content: 50.63

Gene sequence:

>1197_bases
ATGACCCTCAACCGCTATCGTCTGCGGCATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATTGCTGCG
TAAGCCAGACCGCCTGATAAGCCTGGTGTTAATCGGCAATAACCTGGTCAATATTCTTGCTTCCGCGCTCGGCACTATTG
TGGGGATGCGTTTGTACGGGGATGCGGGCGTGGCAATTGCGACTGGTGTGCTTACTTTTGTCGTACTGGTTTTTGCTGAA
GTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCGCCTATCCAAGTAGTTTTCTGCTGGCACCGCTACAAAT
TTTGATGATGCCGCTGGTCTGGTTGCTGAACGCTATTACCCGCATGTTAATGCGCATGATGGGCATCAAAACCGATATCG
TGGTCAGTGGCTCTTTAAGCAAAGAAGAATTACGCACCATTGTGCACGAATCGCGGTCACAAATTTCCCGTCGCAATCAG
GATATGCTGTTGTCGGTACTCGATCTGGAAAAAATGACTGTCGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTAT
TGATATCAACGATGACTGGAAATCGATTCTCCGCCAACTCTCCCACTCACCTCACGGACGCATCGTGCTCTACCGTGACT
CGCTGGACGATGCCATCAGTATGCTGCGTGTGCGTGAAGCCTGGCGGTTGATGTCGGAGAAAAAAGAGTTCACCAAAGAA
ACCATGCTACGTGCCGCGGACGAAATCTATTTTGTCCCGGAAGGTACGCCGCTCAGCACGCAGCTGGTGAAGTTTCAGCG
CAACAAAAAGAAAGTCGGCCTGGTCGTCAACGAGTATGGAGATATTCAGGGGCTGGTGACGGTCGAAGATATTCTCGAAG
AGATTGTTGGTGATTTCACCACGTCGATGTCGCCAACGCTCGCCGAAGAGGTCACGCCGCAAAACGACGGTTCGGTGATT
ATCGATGGCACTGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAA
TGGCGTCATTCTTGAGGTACTGGAAGAAATTCCTGTCGCAGGAACTCGCGTGCGTATTGGCGAGTACGATATCGATATTC
TCGATGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGTGAGAGTGTGGCGGAGTAA

Upstream 100 bases:

>100_bases
GGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTT
CCGGGTCCGAAACCGGAATG

Downstream 100 bases:

>100_bases
CGAAAACGGCCCGGCATTCGCATGCTGGGCCGTGATTTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAA
CCATCGCCGCACGAATCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAE
VLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQ
DMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKE
TMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVI
IDGTANVREINKAFNWHLPEDDARTVNGVILEVLEEIPVAGTRVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE

Sequences:

>Translated_398_residues
MTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAE
VLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQ
DMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKE
TMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVI
IDGTANVREINKAFNWHLPEDDARTVNGVILEVLEEIPVAGTRVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE
>Mature_397_residues
TLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEV
LPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQD
MLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKET
MLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVII
DGTANVREINKAFNWHLPEDDARTVNGVILEVLEEIPVAGTRVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=360, Percent_Identity=25.8333333333333, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI94681046, Length=315, Percent_Identity=26.031746031746, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI40068055, Length=315, Percent_Identity=23.8095238095238, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI40068053, Length=315, Percent_Identity=23.8095238095238, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI145693175, Length=398, Percent_Identity=99.748743718593, Blast_Score=803, Evalue=0.0,
Organism=Escherichia coli, GI1790664, Length=407, Percent_Identity=22.1130221130221, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1786879, Length=250, Percent_Identity=26, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI87082033, Length=277, Percent_Identity=27.4368231046931, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788119, Length=235, Percent_Identity=29.3617021276596, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 44819; Mature: 44688

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYG
CCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHEEEHEECCHHHHHHHHHHHHHHHHHHCC
DAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVP
HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
RSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKE
HHHEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
TMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFT
HHHHHHHCEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHH
TSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEVLEEIPVA
CCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
GTRVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE
CCEEEECCCCEEEEECCHHHHHHHHCCCCCHHHHHHCC
>Mature Secondary Structure 
TLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYG
CCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHEEEHEECCHHHHHHHHHHHHHHHHHHCC
DAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVP
HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
RSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKE
HHHEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
TMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFT
HHHHHHHCEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHH
TSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEVLEEIPVA
CCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
GTRVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE
CCEEEECCCCEEEEECCHHHHHHHHCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]