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The map label for this gene is ygaM [H]

Identifier: 218547813

GI number: 218547813

Start: 413866

End: 414207

Strand: Reverse

Name: ygaM [H]

Synonym: EFER_0400

Alternate gene names: 218547813

Gene position: 414207-413866 (Counterclockwise)

Preceding gene: 218547815

Following gene: 218547811

Centisome position: 9.03

GC content: 54.09

Gene sequence:

>342_bases
ATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTCGATGATGGCGTGCAGGATATCCAGAATGATGTCAATCA
ATTGGCTGACAGTCTCGAATCTGTATTGAAGTCCTGGGGCAGCGACGCCAAAGGGGAAGCCGAAGCCGCACGCAATAAAG
CTCAGGCATTGCTGAAAGAAACCAGAGCGCGAATGCATGGTCGTACTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGC
TGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACT
GTTGAGCATGCGCAAATCGTAG

Upstream 100 bases:

>100_bases
CTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAATCTCAGTTAAGAAAATTATGGTCTACACT
GAAAATTACATCGAATTCTA

Downstream 100 bases:

>100_bases
TGCAACAATGATAATAAATACGCGTCTTGACCCCGGAACCTGATTTCGGGGTTTTTTAGCTTAAGGCTTTACGTAATTGT
TGTGCTACCTGTCGCGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MGDHMFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARNKAQALLKETRARMHGRTRVQQAARDAVG
CADSFVRERPWCSVGTAAAVGIFIGALLSMRKS

Sequences:

>Translated_113_residues
MGDHMFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARNKAQALLKETRARMHGRTRVQQAARDAVG
CADSFVRERPWCSVGTAAAVGIFIGALLSMRKS
>Mature_112_residues
GDHMFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARNKAQALLKETRARMHGRTRVQQAARDAVGC
ADSFVRERPWCSVGTAAAVGIFIGALLSMRKS

Specific function: Unknown

COG id: COG4575

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli elaB and yqjD [H]

Homologues:

Organism=Escherichia coli, GI1789027, Length=113, Percent_Identity=99.1150442477876, Blast_Score=230, Evalue=2e-62,
Organism=Escherichia coli, GI1789485, Length=96, Percent_Identity=39.5833333333333, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010279 [H]

Pfam domain/function: PF05957 DUF883 [H]

EC number: NA

Molecular weight: Translated: 12315; Mature: 12184

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDHMFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARNKAQALLKE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GDHMFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARNKAQALLKE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]