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The map label for this gene is ygaW [H]

Identifier: 218547815

GI number: 218547815

Start: 414728

End: 415267

Strand: Reverse

Name: ygaW [H]

Synonym: EFER_0402

Alternate gene names: 218547815

Gene position: 415267-414728 (Counterclockwise)

Preceding gene: 218547817

Following gene: 218547813

Centisome position: 9.05

GC content: 44.81

Gene sequence:

>540_bases
TTGTCAGAAAATAGCCAGCGATATAACCTATGCATTAACAGAAGCGGTAAATCATCTGTCTGCCTTAACCTCTTAATGGA
GTCTCACACTATGCTTTCAGCACAGTCACGCTGGCGTAACGCTATGGCTGATACATTTGCGATGGTTGTCTATTGCACTG
TTGTGAACATGCTTATCGAGATTTTCCTCTCCGGCATGAGCTTTGAGCAGTCGCTTTCGTCACGACTGGTGGCGATTCCT
GTCAATATCCTAATCGCCTGCCCTTATGGGATCTATCGGGATTTCTTTATGCGTCAGGCGCGTAAAATGAATAACAAAGG
ATGGACGAAAACAATTGCCGATATACTGGCTTATGTAACGTTTCAGTCGCCAGTATATGCCGCAATTCTCTGGGTAATAG
GTGCAGACTGGCATCAGATTGTCGCTGCCGTCAGCTCAAATATGGTGATTTCTATGATGATGGGTGCGGTATATGGCTAT
TTTCTTGACTATTGCCGCCGTCTGTTTAAAGTCACCAGCTATCAACAGCTTAAAGCTTGA

Upstream 100 bases:

>100_bases
ATATAAAAAGTATTATATAAAAAATCCACCGACGTTCAAAAAACAATCTCAAAATAGCATTTTATCTACAAAAGCATTTT
AAATAAAAATATTCACCTGG

Downstream 100 bases:

>100_bases
TTCTTCTTTTCGCGACTGGCATCGCCAGTCGCGTCTTTAACTGGCTTCGCCAAATAAACCATTCAAATAACGTTCAAGCG
CAACACGCGAACTAAAGCCA

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSENSQRYNLCINRSGKSSVCLNLLMESHTMLSAQSRWRNAMADTFAMVVYCTVVNMLIEIFLSGMSFEQSLSSRLVAIP
VNILIACPYGIYRDFFMRQARKMNNKGWTKTIADILAYVTFQSPVYAAILWVIGADWHQIVAAVSSNMVISMMMGAVYGY
FLDYCRRLFKVTSYQQLKA

Sequences:

>Translated_179_residues
MSENSQRYNLCINRSGKSSVCLNLLMESHTMLSAQSRWRNAMADTFAMVVYCTVVNMLIEIFLSGMSFEQSLSSRLVAIP
VNILIACPYGIYRDFFMRQARKMNNKGWTKTIADILAYVTFQSPVYAAILWVIGADWHQIVAAVSSNMVISMMMGAVYGY
FLDYCRRLFKVTSYQQLKA
>Mature_178_residues
SENSQRYNLCINRSGKSSVCLNLLMESHTMLSAQSRWRNAMADTFAMVVYCTVVNMLIEIFLSGMSFEQSLSSRLVAIPV
NILIACPYGIYRDFFMRQARKMNNKGWTKTIADILAYVTFQSPVYAAILWVIGADWHQIVAAVSSNMVISMMMGAVYGYF
LDYCRRLFKVTSYQQLKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789025, Length=149, Percent_Identity=79.1946308724832, Blast_Score=248, Evalue=1e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010574
- ProDom:   PD090021 [H]

Pfam domain/function: PF06610 DUF1144 [H]

EC number: NA

Molecular weight: Translated: 20415; Mature: 20284

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENSQRYNLCINRSGKSSVCLNLLMESHTMLSAQSRWRNAMADTFAMVVYCTVVNMLIE
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFLSGMSFEQSLSSRLVAIPVNILIACPYGIYRDFFMRQARKMNNKGWTKTIADILAYVT
HHHCCCCHHHHHHCCCHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FQSPVYAAILWVIGADWHQIVAAVSSNMVISMMMGAVYGYFLDYCRRLFKVTSYQQLKA
HCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SENSQRYNLCINRSGKSSVCLNLLMESHTMLSAQSRWRNAMADTFAMVVYCTVVNMLIE
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFLSGMSFEQSLSSRLVAIPVNILIACPYGIYRDFFMRQARKMNNKGWTKTIADILAYVT
HHHCCCCHHHHHHCCCHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FQSPVYAAILWVIGADWHQIVAAVSSNMVISMMMGAVYGYFLDYCRRLFKVTSYQQLKA
HCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]