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The map label for this gene is ygaZ [H]

Identifier: 218547802

GI number: 218547802

Start: 402107

End: 402844

Strand: Reverse

Name: ygaZ [H]

Synonym: EFER_0389

Alternate gene names: 218547802

Gene position: 402844-402107 (Counterclockwise)

Preceding gene: 218547803

Following gene: 218547801

Centisome position: 8.78

GC content: 50.81

Gene sequence:

>738_bases
ATGGAAAGCCCTGCCCCTCTGCCCGCTTCTGGTTCGGCAACTTTCATGGAAGGATGCAAAGACAGTTTACCGATTGTTAT
TAGTTATATTCCGGTAGCGTTTGCATTTGGCATGAATGCGACTCGTCTGGGCTTTACGCCCGTCGAAAGTCTGTTTTTCT
CCTGCATTATTTATGCAGGGGCGAGCCAGTTCGTCATTACAACCATGTTGGCAGCTGGCAGCAGTTTATGGGTCGCGGCG
CTGACGGTAATGGCGATGGATGTACGCCATGTGCTGTATGGTCCGTCGTTGCGTAGCCGCATTGCTCTGCGTTTGAGTAA
ACCGAAAACGGCACTGTGGGCGTTTGGCCTGACGGATGAAGTTTTTGCTGCTGCAACCGCAAAACTGGTACGTAATAATC
GCCGCTGGAGTGAAAACTGGATGATCGGGATTGCTTTCAGCTCCTGGTCGTCCTGGGTATTTGGCACGGTGATAGGCGCA
TTTTCTGGCTGCGGTCTGTTACAAGGCTATCCTGCTGTTGAAGCAGCATTAGGCTTTATGTTGCCCGCGCTTTTTATGAG
CTTTTTGCTCGCCTCTTTTCAACGCAAACAATCGCTTTGCGTTACCGCAGCGTTAGTTGGTGCCCTTGCGGGTGTAACGC
TGTTTTCTATCCCCGTTGCCATTCTGGCAGGTATTGTCTGTGGTTGTATTACCGCGTTAATTCAGGCGTTCTGGCAAGGA
GCTCCAGATGAGTTATGA

Upstream 100 bases:

>100_bases
TTTGCACTGATAAGGGTGTTAAGAAGCCCCCCAGTCTGATAAGGTTATGATATTCATTCACTCTATTTATAATTTTAGCG
GTAGATAAGCGTAATACTCT

Downstream 100 bases:

>100_bases
GGTTCTGCTGCTTGGATTGCTGGTTGGCGCGGTTAACTACTGTTTTCGCTATTTGCCGCTACGTCTGCGGGTCGGTAATG
TCCGCCCCGGACGGCGCGGC

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MESPAPLPASGSATFMEGCKDSLPIVISYIPVAFAFGMNATRLGFTPVESLFFSCIIYAGASQFVITTMLAAGSSLWVAA
LTVMAMDVRHVLYGPSLRSRIALRLSKPKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGA
FSGCGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIPVAILAGIVCGCITALIQAFWQG
APDEL

Sequences:

>Translated_245_residues
MESPAPLPASGSATFMEGCKDSLPIVISYIPVAFAFGMNATRLGFTPVESLFFSCIIYAGASQFVITTMLAAGSSLWVAA
LTVMAMDVRHVLYGPSLRSRIALRLSKPKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGA
FSGCGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIPVAILAGIVCGCITALIQAFWQG
APDEL
>Mature_245_residues
MESPAPLPASGSATFMEGCKDSLPIVISYIPVAFAFGMNATRLGFTPVESLFFSCIIYAGASQFVITTMLAAGSSLWVAA
LTVMAMDVRHVLYGPSLRSRIALRLSKPKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGA
FSGCGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIPVAILAGIVCGCITALIQAFWQG
APDEL

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=245, Percent_Identity=93.8775510204082, Blast_Score=462, Evalue=1e-131,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 26029; Mature: 26029

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESPAPLPASGSATFMEGCKDSLPIVISYIPVAFAFGMNATRLGFTPVESLFFSCIIYAG
CCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
ASQFVITTMLAAGSSLWVAALTVMAMDVRHVLYGPSLRSRIALRLSKPKTALWAFGLTDE
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEECCCHHH
VFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGAFSGCGLLQGYPAVEAALGFM
HHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHH
LPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIPVAILAGIVCGCITALIQAFWQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APDEL
CCCCC
>Mature Secondary Structure
MESPAPLPASGSATFMEGCKDSLPIVISYIPVAFAFGMNATRLGFTPVESLFFSCIIYAG
CCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
ASQFVITTMLAAGSSLWVAALTVMAMDVRHVLYGPSLRSRIALRLSKPKTALWAFGLTDE
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEECCCHHH
VFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGAFSGCGLLQGYPAVEAALGFM
HHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHH
LPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIPVAILAGIVCGCITALIQAFWQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APDEL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]