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The map label for this gene is ygaH [H]

Identifier: 218547801

GI number: 218547801

Start: 401782

End: 402117

Strand: Reverse

Name: ygaH [H]

Synonym: EFER_0388

Alternate gene names: 218547801

Gene position: 402117-401782 (Counterclockwise)

Preceding gene: 218547802

Following gene: 218547800

Centisome position: 8.76

GC content: 52.08

Gene sequence:

>336_bases
ATGAGTTATGAGGTTCTGCTGCTTGGATTGCTGGTTGGCGCGGTTAACTACTGTTTTCGCTATTTGCCGCTACGTCTGCG
GGTCGGTAATGTCCGCCCCGGACGGCGCGGCACGATCGGGATCTTACTCGACACAATTGGCATCGCCTCGATTTGCGCAC
TACTGGTTGTTTCTACTGCACCAGAAGTGATGCATGACAGCCGTCGGTTCATTCCAACGCTGGTGGGTTTTGCTGTACTG
GGAGCGAGTTTTTACAAAACACGCAGCATCATTGTTCCGACTCTTTTGAGTGCGCTGGGCTACGGATTAGCCTGGAAAGT
GATGGCGGTTATATAA

Upstream 100 bases:

>100_bases
GCGGGTGTAACGCTGTTTTCTATCCCCGTTGCCATTCTGGCAGGTATTGTCTGTGGTTGTATTACCGCGTTAATTCAGGC
GTTCTGGCAAGGAGCTCCAG

Downstream 100 bases:

>100_bases
ACCAAAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGG
TCATACCCAAATGGATAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSYEVLLLGLLVGAVNYCFRYLPLRLRVGNVRPGRRGTIGILLDTIGIASICALLVVSTAPEVMHDSRRFIPTLVGFAVL
GASFYKTRSIIVPTLLSALGYGLAWKVMAVI

Sequences:

>Translated_111_residues
MSYEVLLLGLLVGAVNYCFRYLPLRLRVGNVRPGRRGTIGILLDTIGIASICALLVVSTAPEVMHDSRRFIPTLVGFAVL
GASFYKTRSIIVPTLLSALGYGLAWKVMAVI
>Mature_110_residues
SYEVLLLGLLVGAVNYCFRYLPLRLRVGNVRPGRRGTIGILLDTIGIASICALLVVSTAPEVMHDSRRFIPTLVGFAVLG
ASFYKTRSIIVPTLLSALGYGLAWKVMAVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789039, Length=111, Percent_Identity=89.1891891891892, Blast_Score=186, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008407 [H]

Pfam domain/function: PF05437 AzlD [H]

EC number: NA

Molecular weight: Translated: 12038; Mature: 11907

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYEVLLLGLLVGAVNYCFRYLPLRLRVGNVRPGRRGTIGILLDTIGIASICALLVVSTA
CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PEVMHDSRRFIPTLVGFAVLGASFYKTRSIIVPTLLSALGYGLAWKVMAVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
SYEVLLLGLLVGAVNYCFRYLPLRLRVGNVRPGRRGTIGILLDTIGIASICALLVVSTA
CHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PEVMHDSRRFIPTLVGFAVLGASFYKTRSIIVPTLLSALGYGLAWKVMAVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 7730261 [H]