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The map label for this gene is eryD [H]

Identifier: 218547750

GI number: 218547750

Start: 345852

End: 346805

Strand: Reverse

Name: eryD [H]

Synonym: EFER_0335

Alternate gene names: 218547750

Gene position: 346805-345852 (Counterclockwise)

Preceding gene: 218547751

Following gene: 218547749

Centisome position: 7.56

GC content: 52.2

Gene sequence:

>954_bases
ATGAAATATATGGATAGCGACGAGACACTTAGTTTGCGTGCGGCATGGCTGCACTATGTTGGCGGTCTCACCCAGGCGGA
AGTGGCAAAACGGCTGGGATTGCCATCGGTGAAAACGCATCGACTGATTGCCCGCGCCGTATCTGAAGGCGCGGTTAAGG
TCAGTATCGAGGGTGATATTGTAGCCTGCGTAGAACTGGAGTCGCAGTTAGCAAAACGCTTCGGCCTCACATTTTGTTGT
GTGGCGCCGGATACCGCAGAGGAAGGACTCCCGGTCCGCGCACTGGGGATGGCAGGCGCGGATTACCTTCGCAACATACT
GAAAAATCATCCTGATATCACCATAGGAATGGGCCATGGGCGAACCCTTTCTGCTGCTATTCATCAGCTACGCCAAATCG
ATGCCCATCAGGTGCGCTTTGTTTCGCTGCTCGGCTGCCTGACGCGCAATTACGCCCTCAATCCCCATGATGTTATGCAT
CGCATTGCCGAAAAAACCGGAGCTCAGGCTTATATGATGCCCGTGCCATTCATCGCCAATAGTGTTGAAGACAAAGAAGT
GATGCTTTCTCAACACGGTGTGCGTCAGGTGTTTGATATGGCAATGGGTAGCGCAATGAAATTAGTGGGGATTGGTACTG
TGGAACCCGCAGCTCAGCTGGTGGAGGCCGGGATGATCGACGTGAGTGAAATTAATGCGATATCAGCCTCGGGGGCAATA
GGCGAGATTTTAGGCCATTTCTTTACCGCCAAAGGTCAACGAATTGATAATGGTTTGACCGCCAGGACAATGACAATTCC
TTTGGATCTGCAACGCCGCGACAATATTGTGGCACTGGCGGGTGGGCCAACGAAAATATCCGCCATCCAGGCGGTGCTGG
CCAGTGGGCTTATTAATGGTCTAATTACTGACGAATTAACGGCCAGGGCATTGCTTGATGCAACAGCAGACTGA

Upstream 100 bases:

>100_bases
GCGCTGAAATAGCCGAAAGCGTTGCCTACTGGGCGCCTTATATTGATACCGGCGTTGAGGATTTGAATATCTGAACGCTG
TAAAAAGTCTGGAACAAGAG

Downstream 100 bases:

>100_bases
CACATACTGAGAGTTATTGTTTACTCCGGGAAGTTTCAGAGCAAAAGTGTGAGCCTTCTTCCTCCCCTTTTTTTACCCAA
TGCAATTTACACACACTTCA

Product: Ery operon repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKYMDSDETLSLRAAWLHYVGGLTQAEVAKRLGLPSVKTHRLIARAVSEGAVKVSIEGDIVACVELESQLAKRFGLTFCC
VAPDTAEEGLPVRALGMAGADYLRNILKNHPDITIGMGHGRTLSAAIHQLRQIDAHQVRFVSLLGCLTRNYALNPHDVMH
RIAEKTGAQAYMMPVPFIANSVEDKEVMLSQHGVRQVFDMAMGSAMKLVGIGTVEPAAQLVEAGMIDVSEINAISASGAI
GEILGHFFTAKGQRIDNGLTARTMTIPLDLQRRDNIVALAGGPTKISAIQAVLASGLINGLITDELTARALLDATAD

Sequences:

>Translated_317_residues
MKYMDSDETLSLRAAWLHYVGGLTQAEVAKRLGLPSVKTHRLIARAVSEGAVKVSIEGDIVACVELESQLAKRFGLTFCC
VAPDTAEEGLPVRALGMAGADYLRNILKNHPDITIGMGHGRTLSAAIHQLRQIDAHQVRFVSLLGCLTRNYALNPHDVMH
RIAEKTGAQAYMMPVPFIANSVEDKEVMLSQHGVRQVFDMAMGSAMKLVGIGTVEPAAQLVEAGMIDVSEINAISASGAI
GEILGHFFTAKGQRIDNGLTARTMTIPLDLQRRDNIVALAGGPTKISAIQAVLASGLINGLITDELTARALLDATAD
>Mature_317_residues
MKYMDSDETLSLRAAWLHYVGGLTQAEVAKRLGLPSVKTHRLIARAVSEGAVKVSIEGDIVACVELESQLAKRFGLTFCC
VAPDTAEEGLPVRALGMAGADYLRNILKNHPDITIGMGHGRTLSAAIHQLRQIDAHQVRFVSLLGCLTRNYALNPHDVMH
RIAEKTGAQAYMMPVPFIANSVEDKEVMLSQHGVRQVFDMAMGSAMKLVGIGTVEPAAQLVEAGMIDVSEINAISASGAI
GEILGHFFTAKGQRIDNGLTARTMTIPLDLQRRDNIVALAGGPTKISAIQAVLASGLINGLITDELTARALLDATAD

Specific function: Regulates transcription of many different genes. In the absence of autoinducer 2 (AI-2), represses transcription of the lsrACDBFG operon and its own transcription. In the presence of AI- 2, lsrR is inactivated by binding phospho-AI-2, leading to the trans

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=316, Percent_Identity=31.9620253164557, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI87082414, Length=324, Percent_Identity=24.6913580246914, Blast_Score=94, Evalue=9e-21,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 33874; Mature: 33874

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYMDSDETLSLRAAWLHYVGGLTQAEVAKRLGLPSVKTHRLIARAVSEGAVKVSIEGDI
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCE
VACVELESQLAKRFGLTFCCVAPDTAEEGLPVRALGMAGADYLRNILKNHPDITIGMGHG
EEEHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEHHCCCHHHHHHHHHCCCCEEEECCCC
RTLSAAIHQLRQIDAHQVRFVSLLGCLTRNYALNPHDVMHRIAEKTGAQAYMMPVPFIAN
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCHHHHC
SVEDKEVMLSQHGVRQVFDMAMGSAMKLVGIGTVEPAAQLVEAGMIDVSEINAISASGAI
CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHCHHCCCCHH
GEILGHFFTAKGQRIDNGLTARTMTIPLDLQRRDNIVALAGGPTKISAIQAVLASGLING
HHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHH
LITDELTARALLDATAD
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKYMDSDETLSLRAAWLHYVGGLTQAEVAKRLGLPSVKTHRLIARAVSEGAVKVSIEGDI
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCE
VACVELESQLAKRFGLTFCCVAPDTAEEGLPVRALGMAGADYLRNILKNHPDITIGMGHG
EEEHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEHHCCCHHHHHHHHHCCCCEEEECCCC
RTLSAAIHQLRQIDAHQVRFVSLLGCLTRNYALNPHDVMHRIAEKTGAQAYMMPVPFIAN
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCHHHHC
SVEDKEVMLSQHGVRQVFDMAMGSAMKLVGIGTVEPAAQLVEAGMIDVSEINAISASGAI
CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHCHHCCCCHH
GEILGHFFTAKGQRIDNGLTARTMTIPLDLQRRDNIVALAGGPTKISAIQAVLASGLING
HHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHH
LITDELTARALLDATAD
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA