| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is eryC
Identifier: 218547751
GI number: 218547751
Start: 346832
End: 347944
Strand: Reverse
Name: eryC
Synonym: EFER_0336
Alternate gene names: NA
Gene position: 347944-346832 (Counterclockwise)
Preceding gene: 218547752
Following gene: 218547750
Centisome position: 7.58
GC content: 51.39
Gene sequence:
>1113_bases ATGAAGCCGAAGCGCGTTACCTCATCGAAAAAGAGTGGGCGAAACAGGCGGATGATATTCTTTGGCGACGGACCAAGCAT GGTCTTCACCTTAGCGACGATGAGCAACGGGCCTTTAGCGGATGGTTTACCGCCACCAGACATTCGCCACTACAGGCTAA AGCCAGCTAAGGAGAGAATAATGGCGCTTTCTTTGTCTTTAAATACCAATCCATTGGTTAACCGGATTGCGACGCCGGAA GATCTGCTTAATACCATTGCCCGGCAAATTCGTATTCGGGATATTCAGCTTACTCATGAATTTATCAACCCAGGCTGGCC TGCGTCGACGATCGCCCAGATGCTGCGGCGAATGAAAAAAGCCCAGCTTTCCACCGGGGTACGTGTGACATCCGGTATGA CCGGGCCTTATGGTCGGCTAAACCATTTCGGGCATCCGGATGCGTCAGTACGCCGTTACTACATCGACTGGTTTAAAACT TTTGCGGATATCACGGCTGAACTTGGCGGTGACGCCATTGGTTCACAGTTTGCGATTTTCACGCAACAGGATCACAACGA CCCACAGCAGCGGGAAGCGTTGATTAACATCGCCATTGATTGCTGGGGAGAAGTGGCAGAACACGCAAAATCTGCCGGAT TAAAATATCTCTTCTGGGAACCAATGAGTATAGGCCGCGAGTTCGGTGAAACCATCCCCGCTTGTCTGGCGCTGCAAAAC AGACTGAGCGCGGCCCCGTTTGCCATTCCCATGTGGATGATGGCAGATATTGATCATGGTGATGTCACCTCACCCGATCC GCGGGATTATGATCCGTATGCCTGGGCGCAAGCCGTTCCCCGCTACTCGCCTATTATTCATATAAAGCAAAGTATGCAGG ATAAAGGTGGGCACCGCCCCTTTACTGCTCAGTACAATAAACACGGTCGCATTCAGCCAGAAGCGTTACTGAATGCCCTG GCCCGTGGCGGCGCTAAAGATAATGAGATATGCCTGGAACTGAGTTTCAAAGAACGGGAACCGACCGACAGCCTGACTTG CGCTGAAATAGCCGAAAGCGTTGCCTACTGGGCGCCTTATATTGATACCGGCGTTGAGGATTTGAATATCTGA
Upstream 100 bases:
>100_bases TGTAAGCATTACGCCCGTCTGTATGGCGCGCGGATGCCACAGCTGTTAGGGGAAGCTACGAGCCTTGAGGAGTTAGGCCT GCACTTCGGCGGTCTGTTTT
Downstream 100 bases:
>100_bases ACGCTGTAAAAAGTCTGGAACAAGAGATGAAATATATGGATAGCGACGAGACACTTAGTTTGCGTGCGGCATGGCTGCAC TATGTTGGCGGTCTCACCCA
Product: D-erythrulose-phosphate dehydrogenase
Products: NA
Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; D-Erythrulose-1-Phosphate Dehydrogenase; D-Erythrulose-Phosphate Dehydrogenase; Xylose Isomerase-Like TIM Barrel; D-Erythrulose-1-Phosphate Dehydrogenase Protein; Xylose Isomerase Domain-Containing Protein; Erythrulose 4-Phosphate Dehydrogenase
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MKPKRVTSSKKSGRNRRMIFFGDGPSMVFTLATMSNGPLADGLPPPDIRHYRLKPAKERIMALSLSLNTNPLVNRIATPE DLLNTIARQIRIRDIQLTHEFINPGWPASTIAQMLRRMKKAQLSTGVRVTSGMTGPYGRLNHFGHPDASVRRYYIDWFKT FADITAELGGDAIGSQFAIFTQQDHNDPQQREALINIAIDCWGEVAEHAKSAGLKYLFWEPMSIGREFGETIPACLALQN RLSAAPFAIPMWMMADIDHGDVTSPDPRDYDPYAWAQAVPRYSPIIHIKQSMQDKGGHRPFTAQYNKHGRIQPEALLNAL ARGGAKDNEICLELSFKEREPTDSLTCAEIAESVAYWAPYIDTGVEDLNI
Sequences:
>Translated_370_residues MKPKRVTSSKKSGRNRRMIFFGDGPSMVFTLATMSNGPLADGLPPPDIRHYRLKPAKERIMALSLSLNTNPLVNRIATPE DLLNTIARQIRIRDIQLTHEFINPGWPASTIAQMLRRMKKAQLSTGVRVTSGMTGPYGRLNHFGHPDASVRRYYIDWFKT FADITAELGGDAIGSQFAIFTQQDHNDPQQREALINIAIDCWGEVAEHAKSAGLKYLFWEPMSIGREFGETIPACLALQN RLSAAPFAIPMWMMADIDHGDVTSPDPRDYDPYAWAQAVPRYSPIIHIKQSMQDKGGHRPFTAQYNKHGRIQPEALLNAL ARGGAKDNEICLELSFKEREPTDSLTCAEIAESVAYWAPYIDTGVEDLNI >Mature_370_residues MKPKRVTSSKKSGRNRRMIFFGDGPSMVFTLATMSNGPLADGLPPPDIRHYRLKPAKERIMALSLSLNTNPLVNRIATPE DLLNTIARQIRIRDIQLTHEFINPGWPASTIAQMLRRMKKAQLSTGVRVTSGMTGPYGRLNHFGHPDASVRRYYIDWFKT FADITAELGGDAIGSQFAIFTQQDHNDPQQREALINIAIDCWGEVAEHAKSAGLKYLFWEPMSIGREFGETIPACLALQN RLSAAPFAIPMWMMADIDHGDVTSPDPRDYDPYAWAQAVPRYSPIIHIKQSMQDKGGHRPFTAQYNKHGRIQPEALLNAL ARGGAKDNEICLELSFKEREPTDSLTCAEIAESVAYWAPYIDTGVEDLNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41453; Mature: 41453
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPKRVTSSKKSGRNRRMIFFGDGPSMVFTLATMSNGPLADGLPPPDIRHYRLKPAKERI CCCCCCCCHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHEE MALSLSLNTNPLVNRIATPEDLLNTIARQIRIRDIQLTHEFINPGWPASTIAQMLRRMKK EEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AQLSTGVRVTSGMTGPYGRLNHFGHPDASVRRYYIDWFKTFADITAELGGDAIGSQFAIF HHHHCCCEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE TQQDHNDPQQREALINIAIDCWGEVAEHAKSAGLKYLFWEPMSIGREFGETIPACLALQN ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHH RLSAAPFAIPMWMMADIDHGDVTSPDPRDYDPYAWAQAVPRYSPIIHIKQSMQDKGGHRP HHCCCCHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCC FTAQYNKHGRIQPEALLNALARGGAKDNEICLELSFKEREPTDSLTCAEIAESVAYWAPY EECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH IDTGVEDLNI HHCCCHHCCC >Mature Secondary Structure MKPKRVTSSKKSGRNRRMIFFGDGPSMVFTLATMSNGPLADGLPPPDIRHYRLKPAKERI CCCCCCCCHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHEE MALSLSLNTNPLVNRIATPEDLLNTIARQIRIRDIQLTHEFINPGWPASTIAQMLRRMKK EEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AQLSTGVRVTSGMTGPYGRLNHFGHPDASVRRYYIDWFKTFADITAELGGDAIGSQFAIF HHHHCCCEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE TQQDHNDPQQREALINIAIDCWGEVAEHAKSAGLKYLFWEPMSIGREFGETIPACLALQN ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHH RLSAAPFAIPMWMMADIDHGDVTSPDPRDYDPYAWAQAVPRYSPIIHIKQSMQDKGGHRP HHCCCCHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCC FTAQYNKHGRIQPEALLNALARGGAKDNEICLELSFKEREPTDSLTCAEIAESVAYWAPY EECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH IDTGVEDLNI HHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA