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The map label for this gene is yqcC [H]

Identifier: 218547689

GI number: 218547689

Start: 284069

End: 284602

Strand: Direct

Name: yqcC [H]

Synonym: EFER_0269

Alternate gene names: 218547689

Gene position: 284069-284602 (Clockwise)

Preceding gene: 218547688

Following gene: 218547690

Centisome position: 6.19

GC content: 50.94

Gene sequence:

>534_bases
GTGGTGTGTGCAGGATGCGCGAGTTCAGGACGAACAACAGGTCGCAAGACCACAGGAAAAGTTGTCACGGATGAGCAGGG
AGCAACAAATGTAGCTGGAATGCTGCAAAACGAATCGGGAGCACTGTTTATACAGTGCTCCCTTTTTTTATTTCCTCGTG
GCAGATGCTATCCTTCGCAGCAGATTTCTTCCCTTGAGGTTTTCATGATGACGCATGAACAAGTGCGCCAGCAGTTGCTC
GTCCTGGAGTCGCTGCTGCGTGAACATCAATTCTGGCAAACTGAGGCACCGCAAGCCTATCAGTTTACCAGCACGCAACC
GTTCTTTATGGACACGATGGAACCGCTGGAGTGGCTCCAGTGGGTTTTAATCCCACGTATGCACGCTTTGCTGGATAGTC
ATCAGCCTTTACCTGATGCGTTTGCTGTGGCGCCATACTATGAAATGGCGCTGGAAAACGATCATCCTCAGCGGGAGCTG
TTACTGGCAGAGCTGCAAAAGCTCGATGCCTTATTTGCGGATGATGCCAACTGA

Upstream 100 bases:

>100_bases
TGCGTTAAGGGACACCTCCAGGACGGAGAACGAGAGCTGAACAGGATGGTCAGTGGGTCAGGAAGGCCAGGATGCTTCAG
GATGAAGTAATCACACCGGG

Downstream 100 bases:

>100_bases
TGCTGGAAATACTCTACCAGGATGAATGGCTGGTTGCGGTAAATAAACCTTCCGGCTGGCTGGTTCATCGCAGCTGGCTG
GATCGCGACGAGAAAGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MVCAGCASSGRTTGRKTTGKVVTDEQGATNVAGMLQNESGALFIQCSLFLFPRGRCYPSQQISSLEVFMMTHEQVRQQLL
VLESLLREHQFWQTEAPQAYQFTSTQPFFMDTMEPLEWLQWVLIPRMHALLDSHQPLPDAFAVAPYYEMALENDHPQREL
LLAELQKLDALFADDAN

Sequences:

>Translated_177_residues
MVCAGCASSGRTTGRKTTGKVVTDEQGATNVAGMLQNESGALFIQCSLFLFPRGRCYPSQQISSLEVFMMTHEQVRQQLL
VLESLLREHQFWQTEAPQAYQFTSTQPFFMDTMEPLEWLQWVLIPRMHALLDSHQPLPDAFAVAPYYEMALENDHPQREL
LLAELQKLDALFADDAN
>Mature_177_residues
MVCAGCASSGRTTGRKTTGKVVTDEQGATNVAGMLQNESGALFIQCSLFLFPRGRCYPSQQISSLEVFMMTHEQVRQQLL
VLESLLREHQFWQTEAPQAYQFTSTQPFFMDTMEPLEWLQWVLIPRMHALLDSHQPLPDAFAVAPYYEMALENDHPQREL
LLAELQKLDALFADDAN

Specific function: Unknown

COG id: COG3098

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1436 [H]

Homologues:

Organism=Escherichia coli, GI1789156, Length=109, Percent_Identity=77.0642201834862, Blast_Score=164, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007384 [H]

Pfam domain/function: PF04287 DUF446 [H]

EC number: NA

Molecular weight: Translated: 20099; Mature: 20099

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCAGCASSGRTTGRKTTGKVVTDEQGATNVAGMLQNESGALFIQCSLFLFPRGRCYPSQ
CEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHEECCCCEEEEEEEEEEECCCCCCCCH
QISSLEVFMMTHEQVRQQLLVLESLLREHQFWQTEAPQAYQFTSTQPFFMDTMEPLEWLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHH
WVLIPRMHALLDSHQPLPDAFAVAPYYEMALENDHPQRELLLAELQKLDALFADDAN
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVCAGCASSGRTTGRKTTGKVVTDEQGATNVAGMLQNESGALFIQCSLFLFPRGRCYPSQ
CEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHEECCCCEEEEEEEEEEECCCCCCCCH
QISSLEVFMMTHEQVRQQLLVLESLLREHQFWQTEAPQAYQFTSTQPFFMDTMEPLEWLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHH
WVLIPRMHALLDSHQPLPDAFAVAPYYEMALENDHPQRELLLAELQKLDALFADDAN
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]