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The map label for this gene is oadB [H]

Identifier: 218547467

GI number: 218547467

Start: 27162

End: 28463

Strand: Reverse

Name: oadB [H]

Synonym: EFER_0028

Alternate gene names: 218547467

Gene position: 28463-27162 (Counterclockwise)

Preceding gene: 218547468

Following gene: 218547466

Centisome position: 0.62

GC content: 52.92

Gene sequence:

>1302_bases
ATGGATAGTCTGAATGCCCTGATTCAGGGTATGGGGCTGATGCACCTCAGCGCTGGACAGGCCGTGATGTTGCTGGTCAG
TCTGGTGCTGCTGTGGCTCGCCATTGTGAAAAAGTTCGAACCGTTACTCCTGCTACCCATTGGCTTCGGTGGCCTGCTTT
CCAACATTCCCGAAGCCGGGCTGGCGATGACGGCATTCGAAAGTTTGCTGGTACATCATGATGCCGGGCAACTGGCGATT
GTGGCAGCCAAACTGAACTGCGTGCCAGACGTACATGCGATTAAAGAAGCATTGGCGCTGGCATTACCATCAGTTCAGGC
GCAACTGGAAACACTGGCTGTTGATATGGGCTATACACCGGGCGTGTTGGCGTTGTTCTATAAAGTGGCTATTGGTTCAG
GCGTCGCTCCGCTGGTGATTTTCATGGGCGTAGGCGCAATGACTGATTTTGGTCCGCTGTTGGGGAATCCACGTACGCTA
TTACTGGGTGCAGCTGCGCAGTTTGGTATCTTCGCCACGGTGCTGGGAGCATTAACGCTGAATTACTTCGGCTTTATTTC
GTTCTCCCTGCCACAGGCTGCGGCAATTGGCATCATCGGTGGTGCTGACGGCCCAACCGCGATCTACCTCGCAAGCAAGC
TGGCGCCTGAGCTGTTGGGAGCAATTGCAGTTGCAGCGTACTCTTATATGGCACTGGTACCGCTGATTCAGCCACCGATT
ATGAAGCTCCTGACCACGGAAAAAGAACGCAAGATCCGCATGGTGCAAATGCGTACAGTCAGTAAGCGCGAGAAAATAAT
TTTCCCGTTGGTACTTCTGCTGTTGGTTGCACTGTTATTGCCAGATGCAGCACCGCTGTTGGGGATGTTCTGTTTCGGCA
ACCTGATGCGCGAAAGTGGTGTAGTTGAGCGTCTGAGCGATACCGTACAGAACGCATTGATCAACATCGTAACTATCTTT
TTGGGCCTTTCCGTTGGCGCAAAACTGGTGGCAGATAAGTTCCTCCAGCCGCAAACGCTGGGGATCTTGCTGTTAGGTGT
TATTGCGTTCTGTATCGGTACGGCAGCGGGTGTGTTAATGGCGAAGCTGATGAACGTATTCAGCAAAAACAAAATTAACC
CACTGATCGGTTCAGCCGGTGTTTCGGCAGTGCCCATGGCAGCCCGTGTTTCCAACAAGGTGGGCCTGGAGTCTGACGCC
CAGAACTTCTTGTTGATGCACGCGATGGGGCCGAACGTGGCAGGTGTTATTGGCTCTGCCATCGCCGCTGGGGTGATGTT
GAAATACGTTATGGCAATGTAA

Upstream 100 bases:

>100_bases
CGCTGCACAGGCGGGAACTGTTCGTGGTATTGCGGTCAAGGCCGGAGACGCCGTTGCGGTTGGCGATACCCTGATGACGC
TGGCGTAACGGAGAACTGAG

Downstream 100 bases:

>100_bases
TTTTGTCCTCAAAAGGCGGGAGCGACTCCCGCCTTTTTACTGTTCCTTTTTAAACGTTTTCCGAATTTCATTGAAATATG
CGCCAGGTCGGCCCGTAACC

Product: Oxalacetate decarboxylase beta chain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MDSLNALIQGMGLMHLSAGQAVMLLVSLVLLWLAIVKKFEPLLLLPIGFGGLLSNIPEAGLAMTAFESLLVHHDAGQLAI
VAAKLNCVPDVHAIKEALALALPSVQAQLETLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLGNPRTL
LLGAAAQFGIFATVLGALTLNYFGFISFSLPQAAAIGIIGGADGPTAIYLASKLAPELLGAIAVAAYSYMALVPLIQPPI
MKLLTTEKERKIRMVQMRTVSKREKIIFPLVLLLLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNALINIVTIF
LGLSVGAKLVADKFLQPQTLGILLLGVIAFCIGTAAGVLMAKLMNVFSKNKINPLIGSAGVSAVPMAARVSNKVGLESDA
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVMAM

Sequences:

>Translated_433_residues
MDSLNALIQGMGLMHLSAGQAVMLLVSLVLLWLAIVKKFEPLLLLPIGFGGLLSNIPEAGLAMTAFESLLVHHDAGQLAI
VAAKLNCVPDVHAIKEALALALPSVQAQLETLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLGNPRTL
LLGAAAQFGIFATVLGALTLNYFGFISFSLPQAAAIGIIGGADGPTAIYLASKLAPELLGAIAVAAYSYMALVPLIQPPI
MKLLTTEKERKIRMVQMRTVSKREKIIFPLVLLLLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNALINIVTIF
LGLSVGAKLVADKFLQPQTLGILLLGVIAFCIGTAAGVLMAKLMNVFSKNKINPLIGSAGVSAVPMAARVSNKVGLESDA
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVMAM
>Mature_433_residues
MDSLNALIQGMGLMHLSAGQAVMLLVSLVLLWLAIVKKFEPLLLLPIGFGGLLSNIPEAGLAMTAFESLLVHHDAGQLAI
VAAKLNCVPDVHAIKEALALALPSVQAQLETLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLGNPRTL
LLGAAAQFGIFATVLGALTLNYFGFISFSLPQAAAIGIIGGADGPTAIYLASKLAPELLGAIAVAAYSYMALVPLIQPPI
MKLLTTEKERKIRMVQMRTVSKREKIIFPLVLLLLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNALINIVTIF
LGLSVGAKLVADKFLQPQTLGILLLGVIAFCIGTAAGVLMAKLMNVFSKNKINPLIGSAGVSAVPMAARVSNKVGLESDA
QNFLLMHAMGPNVAGVIGSAIAAGVMLKYVMAM

Specific function: Lyase and sodium transporter [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.3 [H]

Molecular weight: Translated: 45194; Mature: 45194

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLNALIQGMGLMHLSAGQAVMLLVSLVLLWLAIVKKFEPLLLLPIGFGGLLSNIPEAG
CCHHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCC
LAMTAFESLLVHHDAGQLAIVAAKLNCVPDVHAIKEALALALPSVQAQLETLAVDMGYTP
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLGNPRTLLLGAAAQFGIFATVLGALTL
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHH
NYFGFISFSLPQAAAIGIIGGADGPTAIYLASKLAPELLGAIAVAAYSYMALVPLIQPPI
HHHHHHHCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
MKLLTTEKERKIRMVQMRTVSKREKIIFPLVLLLLVALLLPDAAPLLGMFCFGNLMRESG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VVERLSDTVQNALINIVTIFLGLSVGAKLVADKFLQPQTLGILLLGVIAFCIGTAAGVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AKLMNVFSKNKINPLIGSAGVSAVPMAARVSNKVGLESDAQNFLLMHAMGPNVAGVIGSA
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHH
IAAGVMLKYVMAM
HHHHHHHHHHHHC
>Mature Secondary Structure
MDSLNALIQGMGLMHLSAGQAVMLLVSLVLLWLAIVKKFEPLLLLPIGFGGLLSNIPEAG
CCHHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCC
LAMTAFESLLVHHDAGQLAIVAAKLNCVPDVHAIKEALALALPSVQAQLETLAVDMGYTP
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLGNPRTLLLGAAAQFGIFATVLGALTL
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHH
NYFGFISFSLPQAAAIGIIGGADGPTAIYLASKLAPELLGAIAVAAYSYMALVPLIQPPI
HHHHHHHCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
MKLLTTEKERKIRMVQMRTVSKREKIIFPLVLLLLVALLLPDAAPLLGMFCFGNLMRESG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VVERLSDTVQNALINIVTIFLGLSVGAKLVADKFLQPQTLGILLLGVIAFCIGTAAGVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AKLMNVFSKNKINPLIGSAGVSAVPMAARVSNKVGLESDAQNFLLMHAMGPNVAGVIGSA
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHH
IAAGVMLKYVMAM
HHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]