Click here to switch to the map view.

The map label for this gene is fucA [H]

Identifier: 218235880

GI number: 218235880

Start: 372620

End: 373261

Strand: Direct

Name: fucA [H]

Synonym: BCB4264_A0395

Alternate gene names: 218235880

Gene position: 372620-373261 (Clockwise)

Preceding gene: 218232552

Following gene: 218230854

Centisome position: 6.88

GC content: 39.72

Gene sequence:

>642_bases
ATGTTATTACAAAAAGAAAGAGAAGAAATTGTAGCGTATGGAAAGAAAATGATTTCTAGTGGTTTAACAAAGGGAACGGG
CGGTAATATTAGTATCTTTAATCGTGAACAAGGTCTTGTTGCGATTAGCCCAAGTGGTTTAGAGTATTATGAAACAAAGC
CTGAAGATGTAGTTATATTAAACCTAGATGGTGAAGTAGTAGAAGGAGAGAGAAAACCATCAAGTGAATTAGATATGCAC
CTTATTTACTATAGGAAGCGTGAAGATATAAATGCGCTTGTGCATACACATTCTCCTTACGCGAAGACGATTGCGTCATT
AGGATGGGAGCTTCCGGCTGTGTCATATTTAATTGCTTTTGCAGGCCCGAATGTCCGCTGTGCGCCGTATGAAACATTTG
GTACGAAGCAATTAGCGGATGCTGCTTTTGAAGGCATGATTGATCGCCGAGCTGTGCTACTTGCAAATCACGGTTTAATT
GCTGGTGCAAATAATATAAAAATGGCGTTTACTGTTGCAGAAGAGATTGAGTTTTGTGCTCAAATTTATTATCAAACGAA
AAGCATTGGGGAACCAAAGCTATTGCCAGAAGATGAGATGGAGAATTTGGCGAAGAAGTTTGAAGGGTATGGGCAGCAGT
AG

Upstream 100 bases:

>100_bases
TTGTAAAGGCACCGTTTACGGAGAATTTAAAAAAGCTATTTCAATAAGTAGATAAATGTAAAAGTCAGTCATCATAAGCT
TCATACTTAGGGGGATGTAT

Downstream 100 bases:

>100_bases
AATGAAACAAAGACACCCTCAAGAAAAGATCTTGAGGGTGTCTTTTACGCTTTCTTAAGCAACAAATACATAAAGTAAGG
AGCCCCAATTAAAGCAACGA

Product: L-fuculose phosphate aldolase

Products: NA

Alternate protein names: L-fuculose-1-phosphate aldolase [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MLLQKEREEIVAYGKKMISSGLTKGTGGNISIFNREQGLVAISPSGLEYYETKPEDVVILNLDGEVVEGERKPSSELDMH
LIYYRKREDINALVHTHSPYAKTIASLGWELPAVSYLIAFAGPNVRCAPYETFGTKQLADAAFEGMIDRRAVLLANHGLI
AGANNIKMAFTVAEEIEFCAQIYYQTKSIGEPKLLPEDEMENLAKKFEGYGQQ

Sequences:

>Translated_213_residues
MLLQKEREEIVAYGKKMISSGLTKGTGGNISIFNREQGLVAISPSGLEYYETKPEDVVILNLDGEVVEGERKPSSELDMH
LIYYRKREDINALVHTHSPYAKTIASLGWELPAVSYLIAFAGPNVRCAPYETFGTKQLADAAFEGMIDRRAVLLANHGLI
AGANNIKMAFTVAEEIEFCAQIYYQTKSIGEPKLLPEDEMENLAKKFEGYGQQ
>Mature_213_residues
MLLQKEREEIVAYGKKMISSGLTKGTGGNISIFNREQGLVAISPSGLEYYETKPEDVVILNLDGEVVEGERKPSSELDMH
LIYYRKREDINALVHTHSPYAKTIASLGWELPAVSYLIAFAGPNVRCAPYETFGTKQLADAAFEGMIDRRAVLLANHGLI
AGANNIKMAFTVAEEIEFCAQIYYQTKSIGEPKLLPEDEMENLAKKFEGYGQQ

Specific function: Fucose metabolism; third step. [C]

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789164, Length=210, Percent_Identity=36.6666666666667, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1790642, Length=112, Percent_Identity=39.2857142857143, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789094, Length=187, Percent_Identity=30.4812834224599, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790008, Length=221, Percent_Identity=29.4117647058824, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786247, Length=147, Percent_Identity=31.9727891156463, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303
- InterPro:   IPR004782 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: =4.1.2.17 [H]

Molecular weight: Translated: 23669; Mature: 23669

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLQKEREEIVAYGKKMISSGLTKGTGGNISIFNREQGLVAISPSGLEYYETKPEDVVIL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCCCCEECCCCCEEEE
NLDGEVVEGERKPSSELDMHLIYYRKREDINALVHTHSPYAKTIASLGWELPAVSYLIAF
ECCCCEECCCCCCCCCCCEEEEEEECCCCCHHEEECCCHHHHHHHHCCCCCHHHHHHHHH
AGPNVRCAPYETFGTKQLADAAFEGMIDRRAVLLANHGLIAGANNIKMAFTVAEEIEFCA
CCCCCEECCCHHCCHHHHHHHHHHHHHHCCEEEEECCCEEECCCCEEEEEEHHHHHHHHH
QIYYQTKSIGEPKLLPEDEMENLAKKFEGYGQQ
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLLQKEREEIVAYGKKMISSGLTKGTGGNISIFNREQGLVAISPSGLEYYETKPEDVVIL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCCCCEECCCCCEEEE
NLDGEVVEGERKPSSELDMHLIYYRKREDINALVHTHSPYAKTIASLGWELPAVSYLIAF
ECCCCEECCCCCCCCCCCEEEEEEECCCCCHHEEECCCHHHHHHHHCCCCCHHHHHHHHH
AGPNVRCAPYETFGTKQLADAAFEGMIDRRAVLLANHGLIAGANNIKMAFTVAEEIEFCA
CCCCCEECCCHHCCHHHHHHHHHHHHHHCCEEEEECCCEEECCCCEEEEEEHHHHHHHHH
QIYYQTKSIGEPKLLPEDEMENLAKKFEGYGQQ
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]