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The map label for this gene is yqfA [C]

Identifier: 218235560

GI number: 218235560

Start: 2127542

End: 2128198

Strand: Reverse

Name: yqfA [C]

Synonym: BCB4264_A2224

Alternate gene names: 218235560

Gene position: 2128198-2127542 (Counterclockwise)

Preceding gene: 218235238

Following gene: 218232912

Centisome position: 39.27

GC content: 36.38

Gene sequence:

>657_bases
ATGACTGAAAAAATGACACGAATGACCCAATTTGTAAAAGAAGAAATTGCAAATGCAATTACACATGGTATCGGTGCCAT
TTTAAGCATCCCTGCCTTAATCATATTGATTATTCATGCTTCTAAGCACGGTACCGCATCAGCCGTAGTTGCATTTACTG
TTTATGGTGTAAGCATGTTCTTACTGTACTTGTTTTCAACATTGCTACATAGCATTCATCATCCTAAAGTAGAAAAAATA
TTTACTATTTTAGATCATTCAGCCATTTACTTATTGATTGCTGGCACGTATACTCCTTTTCTACTTATTACACTTCGTGG
CCCATTAGGATGGACGTTGCTTGCTATAATATGGACACTAGCAATCGGAGGTATCGTCTTCAAAATTTTCTTTGTACGTC
GCTTTATAAAGGCTTCAACTTTATGTTACATCATTATGGGATGGCTCATAATCGTTGCTATTAAACCACTTTATGAAAAT
CTAACTGGACATGGTTTTTCACTACTTTTAGCAGGTGGAATTTTATATTCTGTTGGAGCTATATTCTTCCTTTGGGAAAA
GCTACCTTTCAACCATGCCATATGGCACCTGTTCGTTTTAGGTGGTAGTGCGATGATGTTCTTCTGTGTACTCTTTTATG
TCTTACCTACAGCATAA

Upstream 100 bases:

>100_bases
AATATAATCAATTATACAAATTTCATTTTCTATTGCTCTTGTGTATGATATGGTAAGGGAAATGACATATTATTTTATGA
TAGTAGAAAGGATTTGCATT

Downstream 100 bases:

>100_bases
TAAAAAAGGATTCAGCTTACTATAAGCTGAATCCTTTTTTATTACTTATGTAATTGTGATGCAATAACTTCCTGTGTATA
CTTCGTTAATTCTTTAATAT

Product: hemolysin III

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTEKMTRMTQFVKEEIANAITHGIGAILSIPALIILIIHASKHGTASAVVAFTVYGVSMFLLYLFSTLLHSIHHPKVEKI
FTILDHSAIYLLIAGTYTPFLLITLRGPLGWTLLAIIWTLAIGGIVFKIFFVRRFIKASTLCYIIMGWLIIVAIKPLYEN
LTGHGFSLLLAGGILYSVGAIFFLWEKLPFNHAIWHLFVLGGSAMMFFCVLFYVLPTA

Sequences:

>Translated_218_residues
MTEKMTRMTQFVKEEIANAITHGIGAILSIPALIILIIHASKHGTASAVVAFTVYGVSMFLLYLFSTLLHSIHHPKVEKI
FTILDHSAIYLLIAGTYTPFLLITLRGPLGWTLLAIIWTLAIGGIVFKIFFVRRFIKASTLCYIIMGWLIIVAIKPLYEN
LTGHGFSLLLAGGILYSVGAIFFLWEKLPFNHAIWHLFVLGGSAMMFFCVLFYVLPTA
>Mature_217_residues
TEKMTRMTQFVKEEIANAITHGIGAILSIPALIILIIHASKHGTASAVVAFTVYGVSMFLLYLFSTLLHSIHHPKVEKIF
TILDHSAIYLLIAGTYTPFLLITLRGPLGWTLLAIIWTLAIGGIVFKIFFVRRFIKASTLCYIIMGWLIIVAIKPLYENL
TGHGFSLLLAGGILYSVGAIFFLWEKLPFNHAIWHLFVLGGSAMMFFCVLFYVLPTA

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=223, Percent_Identity=30.0448430493274, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI52630445, Length=215, Percent_Identity=29.3023255813954, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI154759277, Length=246, Percent_Identity=27.6422764227642, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI1789266, Length=216, Percent_Identity=43.5185185185185, Blast_Score=180, Evalue=7e-47,
Organism=Caenorhabditis elegans, GI71996356, Length=213, Percent_Identity=31.924882629108, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24640324, Length=228, Percent_Identity=28.5087719298246, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 24306; Mature: 24175

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKMTRMTQFVKEEIANAITHGIGAILSIPALIILIIHASKHGTASAVVAFTVYGVSMF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LLYLFSTLLHSIHHPKVEKIFTILDHSAIYLLIAGTYTPFLLITLRGPLGWTLLAIIWTL
HHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEEECCCCCEEEEEECCCHHHHHHHHHHHH
AIGGIVFKIFFVRRFIKASTLCYIIMGWLIIVAIKPLYENLTGHGFSLLLAGGILYSVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IFFLWEKLPFNHAIWHLFVLGGSAMMFFCVLFYVLPTA
HHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEKMTRMTQFVKEEIANAITHGIGAILSIPALIILIIHASKHGTASAVVAFTVYGVSMF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LLYLFSTLLHSIHHPKVEKIFTILDHSAIYLLIAGTYTPFLLITLRGPLGWTLLAIIWTL
HHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEEECCCCCEEEEEECCCHHHHHHHHHHHH
AIGGIVFKIFFVRRFIKASTLCYIIMGWLIIVAIKPLYENLTGHGFSLLLAGGILYSVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IFFLWEKLPFNHAIWHLFVLGGSAMMFFCVLFYVLPTA
HHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]