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The map label for this gene is ykyA [H]

Identifier: 218235476

GI number: 218235476

Start: 4013441

End: 4014103

Strand: Reverse

Name: ykyA [H]

Synonym: BCB4264_A4101

Alternate gene names: 218235476

Gene position: 4014103-4013441 (Counterclockwise)

Preceding gene: 218235135

Following gene: 218230831

Centisome position: 74.07

GC content: 27.0

Gene sequence:

>663_bases
ATGTTGAAATATAGTAAATTAGCAATTGTAACTACATTATCAATGATTTTATTAGCCGGTTGTTTCGGCCCGAAACCAGA
AGAAGAATTATATGTAGCGTTTGAAAACGCTGCTAAACAAGAAAAAACAATGTTTGAAGATGCAAAAAAACTTGAGACTT
TAGAGAAAGAAGGACAAGAATTATATAACCAGATTGTTCAAGAAGGAAAAGATAATAATCAAACTGTTAAAGAAAAACTG
AATCAAGCAGTGAAAAATACAACTGAACGAGAAAAAGTGCTTACAAAAGAAAAAGAAGTTTTAAATAAAGCGCAAGAAGA
AGTGAAGTCAGCTGATAAGTATGTGAAGAAAATTGAAGATAAGAAATTGAAAGATCAAGCTGATAAAGTGAAAAGCACGT
ATGAGAAACGCCACGATTCATTTAATAAAATGTATGACAGCTATAACAAATCTTTAAAACAAGAAAAAGAGTTATATACA
ATGTTACAAGATAAAGGTACTAAATTAAAAGATATTAGTGAAAAAGTAAAAGTAGTAAATCAATCTTATAAGGATATTGA
GTCAGAAAAAGATAAATTTAATGAATTTACAAAGTCTTATAATACAGAAAAAGTAGCTTTTTATAAACAAGCAAATATTA
AAATTAAAGAAGAGAAAAAATAA

Upstream 100 bases:

>100_bases
ATTAATGATCTTCGTAAAAAAGATGCGAGTGTATAGAACAATTACATATTTTATAACTTTTTTATATTACACGATGGTCG
TTTATAAGTAGGAGGAAGAG

Downstream 100 bases:

>100_bases
AACAGTTTGGCCTACACTTGGCCAAACTGTTTTATTTTTTTGTATAAGTACGACTATACCATGGAACAGGCTCACTTAAT
TTTTTTTCTTGTTTTAATGC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MLKYSKLAIVTTLSMILLAGCFGPKPEEELYVAFENAAKQEKTMFEDAKKLETLEKEGQELYNQIVQEGKDNNQTVKEKL
NQAVKNTTEREKVLTKEKEVLNKAQEEVKSADKYVKKIEDKKLKDQADKVKSTYEKRHDSFNKMYDSYNKSLKQEKELYT
MLQDKGTKLKDISEKVKVVNQSYKDIESEKDKFNEFTKSYNTEKVAFYKQANIKIKEEKK

Sequences:

>Translated_220_residues
MLKYSKLAIVTTLSMILLAGCFGPKPEEELYVAFENAAKQEKTMFEDAKKLETLEKEGQELYNQIVQEGKDNNQTVKEKL
NQAVKNTTEREKVLTKEKEVLNKAQEEVKSADKYVKKIEDKKLKDQADKVKSTYEKRHDSFNKMYDSYNKSLKQEKELYT
MLQDKGTKLKDISEKVKVVNQSYKDIESEKDKFNEFTKSYNTEKVAFYKQANIKIKEEKK
>Mature_220_residues
MLKYSKLAIVTTLSMILLAGCFGPKPEEELYVAFENAAKQEKTMFEDAKKLETLEKEGQELYNQIVQEGKDNNQTVKEKL
NQAVKNTTEREKVLTKEKEVLNKAQEEVKSADKYVKKIEDKKLKDQADKVKSTYEKRHDSFNKMYDSYNKSLKQEKELYT
MLQDKGTKLKDISEKVKVVNQSYKDIESEKDKFNEFTKSYNTEKVAFYKQANIKIKEEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019454 [H]

Pfam domain/function: PF10368 YkyA [H]

EC number: NA

Molecular weight: Translated: 25788; Mature: 25788

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKYSKLAIVTTLSMILLAGCFGPKPEEELYVAFENAAKQEKTMFEDAKKLETLEKEGQE
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYNQIVQEGKDNNQTVKEKLNQAVKNTTEREKVLTKEKEVLNKAQEEVKSADKYVKKIED
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKLKDQADKVKSTYEKRHDSFNKMYDSYNKSLKQEKELYTMLQDKGTKLKDISEKVKVVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QSYKDIESEKDKFNEFTKSYNTEKVAFYKQANIKIKEEKK
HHHHHHHHHHHHHHHHHHHCCCHHHHEEHHCCCEECCCCC
>Mature Secondary Structure
MLKYSKLAIVTTLSMILLAGCFGPKPEEELYVAFENAAKQEKTMFEDAKKLETLEKEGQE
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYNQIVQEGKDNNQTVKEKLNQAVKNTTEREKVLTKEKEVLNKAQEEVKSADKYVKKIED
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKLKDQADKVKSTYEKRHDSFNKMYDSYNKSLKQEKELYTMLQDKGTKLKDISEKVKVVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QSYKDIESEKDKFNEFTKSYNTEKVAFYKQANIKIKEEKK
HHHHHHHHHHHHHHHHHHHCCCHHHHEEHHCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1697575; 8969500; 9384377 [H]