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The map label for this gene is rasP [H]

Identifier: 218234918

GI number: 218234918

Start: 3840343

End: 3841599

Strand: Reverse

Name: rasP [H]

Synonym: BCB4264_A3918

Alternate gene names: 218234918

Gene position: 3841599-3840343 (Counterclockwise)

Preceding gene: 218231954

Following gene: 218235963

Centisome position: 70.89

GC content: 36.36

Gene sequence:

>1257_bases
TTGAATACAGCGATTGCCTTTATATTAATTTTCGGTGCACTCGTATTTTTCCATGAGCTAGGGCATCTATATTTCGCAAA
AAGAGCAGGTATTTTATGCCGCGAGTTTGCGATTGGTTTTGGTCCGAAAATATTCTCATTTGAAAAGAATGAAACGGTGT
ATACGATTCGATTACTGCCCCTTGGTGGCTATGTAAGAATGGCCGGCGAGGATGCGGACACAGTTGAGTTAAAGCCTGGG
AAAAAGGTTGGTCTTGTATTAAATGAAAAAGACGAAGTTGTGAAATTAGTTTTTGATGGATATGAAAAGTATCCAAATGT
TCGTGTTATTGAAGTCGAACAAGCTGATTTGGAGCATAATTTAACAATTTCGGGCTATGAAGAGTACGAGGAAGAGCTTC
AAACATTCCGAGTGAATGAAAAGGCTCGTATTATTACTGCGGGGGAAGAAATTCAAATTGCTCCGTATAATAGACAATTT
GGCTCGAAAAAACTAGGGCAACGCGCTTTAACAATCTTTGCGGGTCCTGCAATGAACTTCATTTTAGCATTTGTTATTTT
TGTGATTCTTGGATTTGTACAAGGGGTTCCTATTGACAAACCAATGGTCGGAAAAGTGATGGATAACAGTGCAGCACAGC
AAGCTGGATTGAAAGAGAATGATACAATTCAAGCTATTGATGGGAAAAACACAAGTACATGGAAAGATGTTGTTACTATT
GTACGTGAAAACCCAAATAAAGAAATTACGTTACAAGTAAAGCGTGATAATGAACAGTTTAATGTGAAAGTAACGCCAAC
ACTCGATAAAGAAGGAAAAGACGAAGTTGGTAGAATCGGTGTGTATTCTCCTGTAGAGAAAACAGTAATGGGTTCTATTA
AATCAGGATTTGAACAAACGTACCAATGGACGAAACTAATTTTTGAATCTCTTGTTAAATTAGTAACTGGTCAATTTTCT
ATTAATGAGTTATCAGGTCCAGTAGGAATTTATAATCTAACAGATCAAGTTGTAGATTATGGGTTTACGCGTGTACTAAG
TTTAGCTGCAGTTCTAAGCATTAATCTTGGTTTATTTAATTTATTACCAGTTCCTGCTTTAGATGGTGGCCGTTTATTCT
TCTTCTTAATTGAAGCGTTACGAGGGAAACCAATTGATCGCCAAAAAGAAGGAATGGTTCACTTTATTGGTTTTGCATTA
TTAATGTTACTTATGTTAGTTGTAACTTGGAATGACATTCGTAAGTTTTTCTTGTAA

Upstream 100 bases:

>100_bases
ACAATGTCATTGCACGACCGAGCTTAGAGGAAATTTTGGAAATTGATGCGGCCACAAGACGGTTTGTGATGGAACAAATT
TAGCAAAGGTGGTTATGGAA

Downstream 100 bases:

>100_bases
AATAAAGTGAAACTTATAATGAAATAGAGCTCGTAGAATAAAATCCCTCACCTAACTCGAGGTGAGGGGTTTTACTGCGT
GTAAGAGTAAAATGAAGAGG

Product: putative membrane-associated zinc metalloprotease

Products: NA

Alternate protein names: Regulating alternative sigma factor protease; Regulating anti-sigma-W factor activity protease [H]

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNTAIAFILIFGALVFFHELGHLYFAKRAGILCREFAIGFGPKIFSFEKNETVYTIRLLPLGGYVRMAGEDADTVELKPG
KKVGLVLNEKDEVVKLVFDGYEKYPNVRVIEVEQADLEHNLTISGYEEYEEELQTFRVNEKARIITAGEEIQIAPYNRQF
GSKKLGQRALTIFAGPAMNFILAFVIFVILGFVQGVPIDKPMVGKVMDNSAAQQAGLKENDTIQAIDGKNTSTWKDVVTI
VRENPNKEITLQVKRDNEQFNVKVTPTLDKEGKDEVGRIGVYSPVEKTVMGSIKSGFEQTYQWTKLIFESLVKLVTGQFS
INELSGPVGIYNLTDQVVDYGFTRVLSLAAVLSINLGLFNLLPVPALDGGRLFFFLIEALRGKPIDRQKEGMVHFIGFAL
LMLLMLVVTWNDIRKFFL

Sequences:

>Translated_418_residues
MNTAIAFILIFGALVFFHELGHLYFAKRAGILCREFAIGFGPKIFSFEKNETVYTIRLLPLGGYVRMAGEDADTVELKPG
KKVGLVLNEKDEVVKLVFDGYEKYPNVRVIEVEQADLEHNLTISGYEEYEEELQTFRVNEKARIITAGEEIQIAPYNRQF
GSKKLGQRALTIFAGPAMNFILAFVIFVILGFVQGVPIDKPMVGKVMDNSAAQQAGLKENDTIQAIDGKNTSTWKDVVTI
VRENPNKEITLQVKRDNEQFNVKVTPTLDKEGKDEVGRIGVYSPVEKTVMGSIKSGFEQTYQWTKLIFESLVKLVTGQFS
INELSGPVGIYNLTDQVVDYGFTRVLSLAAVLSINLGLFNLLPVPALDGGRLFFFLIEALRGKPIDRQKEGMVHFIGFAL
LMLLMLVVTWNDIRKFFL
>Mature_418_residues
MNTAIAFILIFGALVFFHELGHLYFAKRAGILCREFAIGFGPKIFSFEKNETVYTIRLLPLGGYVRMAGEDADTVELKPG
KKVGLVLNEKDEVVKLVFDGYEKYPNVRVIEVEQADLEHNLTISGYEEYEEELQTFRVNEKARIITAGEEIQIAPYNRQF
GSKKLGQRALTIFAGPAMNFILAFVIFVILGFVQGVPIDKPMVGKVMDNSAAQQAGLKENDTIQAIDGKNTSTWKDVVTI
VRENPNKEITLQVKRDNEQFNVKVTPTLDKEGKDEVGRIGVYSPVEKTVMGSIKSGFEQTYQWTKLIFESLVKLVTGQFS
INELSGPVGIYNLTDQVVDYGFTRVLSLAAVLSINLGLFNLLPVPALDGGRLFFFLIEALRGKPIDRQKEGMVHFIGFAL
LMLLMLVVTWNDIRKFFL

Specific function: Is responsible for Site-2 cleavage of the RsiW anti- sigma factor. This results, after a third proteolytic step catalyzed by the ClpXP protease, in the release of SigW and the transcription activation of the genes under the control of the sigma-W factor [

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1786373, Length=448, Percent_Identity=29.2410714285714, Blast_Score=161, Evalue=9e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR004387
- InterPro:   IPR008915 [H]

Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 46900; Mature: 46900

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAIAFILIFGALVFFHELGHLYFAKRAGILCREFAIGFGPKIFSFEKNETVYTIRLLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCEEEEEEEEE
LGGYVRMAGEDADTVELKPGKKVGLVLNEKDEVVKLVFDGYEKYPNVRVIEVEQADLEHN
CCCEEEECCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
LTISGYEEYEEELQTFRVNEKARIITAGEEIQIAPYNRQFGSKKLGQRALTIFAGPAMNF
CEECCHHHHHHHHHHEECCCCEEEEECCCEEEEECCCCCCCCHHHCCCEEEEEECHHHHH
ILAFVIFVILGFVQGVPIDKPMVGKVMDNSAAQQAGLKENDTIQAIDGKNTSTWKDVVTI
HHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHCCCCCCCCEEEECCCCCCHHHHHHHH
VRENPNKEITLQVKRDNEQFNVKVTPTLDKEGKDEVGRIGVYSPVEKTVMGSIKSGFEQT
HHCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YQWTKLIFESLVKLVTGQFSINELSGPVGIYNLTDQVVDYGFTRVLSLAAVLSINLGLFN
HHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LLPVPALDGGRLFFFLIEALRGKPIDRQKEGMVHFIGFALLMLLMLVVTWNDIRKFFL
HCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTAIAFILIFGALVFFHELGHLYFAKRAGILCREFAIGFGPKIFSFEKNETVYTIRLLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCEEEEEEEEE
LGGYVRMAGEDADTVELKPGKKVGLVLNEKDEVVKLVFDGYEKYPNVRVIEVEQADLEHN
CCCEEEECCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
LTISGYEEYEEELQTFRVNEKARIITAGEEIQIAPYNRQFGSKKLGQRALTIFAGPAMNF
CEECCHHHHHHHHHHEECCCCEEEEECCCEEEEECCCCCCCCHHHCCCEEEEEECHHHHH
ILAFVIFVILGFVQGVPIDKPMVGKVMDNSAAQQAGLKENDTIQAIDGKNTSTWKDVVTI
HHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHCCCCCCCCEEEECCCCCCHHHHHHHH
VRENPNKEITLQVKRDNEQFNVKVTPTLDKEGKDEVGRIGVYSPVEKTVMGSIKSGFEQT
HHCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YQWTKLIFESLVKLVTGQFSINELSGPVGIYNLTDQVVDYGFTRVLSLAAVLSINLGLFN
HHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LLPVPALDGGRLFFFLIEALRGKPIDRQKEGMVHFIGFALLMLLMLVVTWNDIRKFFL
HCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]