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The map label for this gene is dxr2 [H]

Identifier: 218231954

GI number: 218231954

Start: 3841617

End: 3842759

Strand: Reverse

Name: dxr2 [H]

Synonym: BCB4264_A3919

Alternate gene names: 218231954

Gene position: 3842759-3841617 (Counterclockwise)

Preceding gene: 218230822

Following gene: 218234918

Centisome position: 70.91

GC content: 38.23

Gene sequence:

>1143_bases
ATGAAAAACATTAGTTTATTAGGTGCAAGCGGATCAATTGGTACACAAACTTTAGATGTATTACGCTCGCACCCAGACCA
ATTCCGTCTCGTTGCTTTTTCTGTAGGGAAAAATATTGACTACGCAGTAAAGGTAATTCAAGAATTTTCTCCGCAAATCG
TCTCTGTGCAAAGAGAGGAAGATGTTTTAAAATTACAATCTGTTTCTGGTAATACAAAAATTGTATATGGTAGTGAAGGA
CTTTTAGAAGTAGCATTACATCCAGATGCGGAGATTGTAGTAAATGCTGTTGTAGGTAGCGTAGGGTTGTTACCAACACT
TCGTGCAATTGAGGCGAAAAAAACAATTGGAATTGCAAATAAAGAAACGTTAGTAACTGCAGGACATCTTGTAATGGAAG
CAGCACGAAAACATAATGTTTCGTTACTTCCAGTAGATAGTGAACATTCGGCTATTTTTCAGTGCTTGAATGGTGAAAAT
GAAAAAAGAATTTCTCGTCTTATTATAACGGCTTCTGGTGGAAGTTTCCGTGATAAAACGAGGGATGAATTGCATCATGT
GACCGTAGAAGATGCGCTTCGACATCCAAACTGGTCAATGGGTTCGAAAATTACAATTGATTCTGCTACAATGATGAATA
AGGGACTAGAAGTAATTGAAGCACATTGGCTTTTTGGTATCCCTTATGAGCAAATCGATGTTGTTTTACATAAAGAAAGT
ATTATCCATTCTATGGTTGAATTTGAAGATCGTAGTGTAATGGCGCAGCTTGGTTCACCTGATATGCGAGTACCAATTCA
ATACGCACTTACATATCCTGATAGATTGCCTCTTTCAGACACAAAACAGTTAAACTTATGGGAAATAGGGACGTTGCATT
TTGAGAAAATGGACCAAGAACGATTCCGTTGTTTACGTTTTGCGTATGAAGCTGGAAAAGCAGGTGGAAGTATGCCAGCT
GTAATGAACGCAGCGAATGAAGTAGCTGTTGAAGCCTTTTTACAAAAGAGAATTGGTTTCTTAACAGTGGAAGACCTCAT
TGAAAAAGCAATGAACCATCACAATGTCATTGCACGACCGAGCTTAGAGGAAATTTTGGAAATTGATGCGGCCACAAGAC
GGTTTGTGATGGAACAAATTTAG

Upstream 100 bases:

>100_bases
ATGGTGGTATATTAGACCGAACAGATAGTTGGTTATTCGTTTTACCAATTCTCTACTTCTTATTACAATACAATTAATAA
ATGAACGAGGGGTTGGAGTC

Downstream 100 bases:

>100_bases
CAAAGGTGGTTATGGAATTGAATACAGCGATTGCCTTTATATTAATTTTCGGTGCACTCGTATTTTTCCATGAGCTAGGG
CATCTATATTTCGCAAAAAG

Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Products: NA

Alternate protein names: DXP reductoisomerase 2; 1-deoxyxylulose-5-phosphate reductoisomerase 2; 2-C-methyl-D-erythritol 4-phosphate synthase 2 [H]

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MKNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREEDVLKLQSVSGNTKIVYGSEG
LLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGEN
EKRISRLIITASGGSFRDKTRDELHHVTVEDALRHPNWSMGSKITIDSATMMNKGLEVIEAHWLFGIPYEQIDVVLHKES
IIHSMVEFEDRSVMAQLGSPDMRVPIQYALTYPDRLPLSDTKQLNLWEIGTLHFEKMDQERFRCLRFAYEAGKAGGSMPA
VMNAANEVAVEAFLQKRIGFLTVEDLIEKAMNHHNVIARPSLEEILEIDAATRRFVMEQI

Sequences:

>Translated_380_residues
MKNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREEDVLKLQSVSGNTKIVYGSEG
LLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGEN
EKRISRLIITASGGSFRDKTRDELHHVTVEDALRHPNWSMGSKITIDSATMMNKGLEVIEAHWLFGIPYEQIDVVLHKES
IIHSMVEFEDRSVMAQLGSPDMRVPIQYALTYPDRLPLSDTKQLNLWEIGTLHFEKMDQERFRCLRFAYEAGKAGGSMPA
VMNAANEVAVEAFLQKRIGFLTVEDLIEKAMNHHNVIARPSLEEILEIDAATRRFVMEQI
>Mature_380_residues
MKNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREEDVLKLQSVSGNTKIVYGSEG
LLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGEN
EKRISRLIITASGGSFRDKTRDELHHVTVEDALRHPNWSMGSKITIDSATMMNKGLEVIEAHWLFGIPYEQIDVVLHKES
IIHSMVEFEDRSVMAQLGSPDMRVPIQYALTYPDRLPLSDTKQLNLWEIGTLHFEKMDQERFRCLRFAYEAGKAGGSMPA
VMNAANEVAVEAFLQKRIGFLTVEDLIEKAMNHHNVIARPSLEEILEIDAATRRFVMEQI

Specific function: Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) [H]

COG id: COG0743

COG function: function code I; 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DXR family [H]

Homologues:

Organism=Escherichia coli, GI1786369, Length=394, Percent_Identity=41.6243654822335, Blast_Score=304, Evalue=8e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003821
- InterPro:   IPR013644
- InterPro:   IPR013512
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08436 DXP_redisom_C; PF02670 DXP_reductoisom [H]

EC number: =1.1.1.267 [H]

Molecular weight: Translated: 42256; Mature: 42256

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE
CCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCHH
DVLKLQSVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIAN
HHHHHEECCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRDKT
CCCEEHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCHHEEEEEEEEECCCCCCHHH
RDELHHVTVEDALRHPNWSMGSKITIDSATMMNKGLEVIEAHWLFGIPYEQIDVVLHKES
HHHHHEEEHHHHHCCCCCCCCCEEEECHHHHHHCCHHHEEEHEEECCCHHHHHHEEHHHH
IIHSMVEFEDRSVMAQLGSPDMRVPIQYALTYPDRLPLSDTKQLNLWEIGTLHFEKMDQE
HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHH
RFRCLRFAYEAGKAGGSMPAVMNAANEVAVEAFLQKRIGFLTVEDLIEKAMNHHNVIARP
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCCEEECC
SLEEILEIDAATRRFVMEQI
CHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE
CCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCHH
DVLKLQSVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIGIAN
HHHHHEECCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFRDKT
CCCEEHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCHHEEEEEEEEECCCCCCHHH
RDELHHVTVEDALRHPNWSMGSKITIDSATMMNKGLEVIEAHWLFGIPYEQIDVVLHKES
HHHHHEEEHHHHHCCCCCCCCCEEEECHHHHHHCCHHHEEEHEEECCCHHHHHHEEHHHH
IIHSMVEFEDRSVMAQLGSPDMRVPIQYALTYPDRLPLSDTKQLNLWEIGTLHFEKMDQE
HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHH
RFRCLRFAYEAGKAGGSMPAVMNAANEVAVEAFLQKRIGFLTVEDLIEKAMNHHNVIARP
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCCEEECC
SLEEILEIDAATRRFVMEQI
CHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]