Click here to switch to the map view.

The map label for this gene is yufQ [H]

Identifier: 218234522

GI number: 218234522

Start: 3804238

End: 3805197

Strand: Reverse

Name: yufQ [H]

Synonym: BCB4264_A3887

Alternate gene names: 218234522

Gene position: 3805197-3804238 (Counterclockwise)

Preceding gene: 218235403

Following gene: 218232950

Centisome position: 70.22

GC content: 38.12

Gene sequence:

>960_bases
ATGAGCTTTTTAGATATATTAGCCATTCTTGTGACGGGTACGTTATATACATCGGCACCTATCATTTTCACAGCACTAGG
TGGTGTATTTAGTGAACGATCGGGTGTTGTAAATATCGGATTAGAAGGACTAATGCTATTTGGTGCATTTATTGGAGTCG
TTACAAACTTATTAATGGGTGATACTTGGGGAACGATGACTCCGTGGATTGCGTTACTATTTGCGGCAATTGGTAGTGGA
TTATTTGCATTACTTCATGCGGTAGCTTCTATTACATTCCGAGCAGATCAAGTTGTAAGTGGTGTAGCCATTAACTTCTT
ATCTCTTGGTTTAACAGTATTTGCAATTAAGAAGATTTTTGATAAAGGGCAGACTGACTTTATTCAGTATCGTATTGAAA
AGATTGATATTCCAGGCCTTTCGGATATTCCGGTTTTAGGGAAAATATTTTTCTCGAACGTACCAATAACGTCATATATT
GCCATTATTTTAGCATTCGTTGTTTGGTATGTTATTTATAAAACACCGTTCGGTCTTCGTCTACGTGCTGTTGGTGAACA
CCCAATGGCAGCGGATACGATGGGGATTAACGTATATAAAATGCGCTATATTGGAGTCTGTATTTCAGGAGTGTTTGCTG
GAATTGGTGGAGCGATTTTTGCAATGTCAATTTCTAATAACTTCTCAGGGGCAACTATTACAGGACAAGGTTTCTTAGCT
TTAGCTGCTATGATTTTTGGAAAGTGGAATCCACTAGGCGCACTAGGTGCAGCTCTATTCTTTGGTTTTGCGCAATCTTT
AAGTGTAACGGGCGGAACAATCCCTGTATTAGATCAAATTCCAAGTGTTTTATTAACGATATTACCATATATATTCACAA
TATTAGCGCTTGTCGGTTTTGTAGGTCGTTCTGAAGCTCCTAAAGCATTAGGAACTCCTTATGAAAAAGGAAAACGATAA

Upstream 100 bases:

>100_bases
AGAGCTTATTAATGTAATTATTGCATGTATCATCTTCTTTGTTGCATGTAGTTATGTGTTAAGATGGGCGCTTACACGCA
TGAGCAAGGAGGGGAAATAA

Downstream 100 bases:

>100_bases
GTATTTTATAAGTATAAAAAAGCTCGCACATTAGTGTGGGCTTTTTTACATAGAATATATTTAATACGGAATTTTACTAT
GTTCCTTACATATTAAAGTT

Product: sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSFLDILAILVTGTLYTSAPIIFTALGGVFSERSGVVNIGLEGLMLFGAFIGVVTNLLMGDTWGTMTPWIALLFAAIGSG
LFALLHAVASITFRADQVVSGVAINFLSLGLTVFAIKKIFDKGQTDFIQYRIEKIDIPGLSDIPVLGKIFFSNVPITSYI
AIILAFVVWYVIYKTPFGLRLRAVGEHPMAADTMGINVYKMRYIGVCISGVFAGIGGAIFAMSISNNFSGATITGQGFLA
LAAMIFGKWNPLGALGAALFFGFAQSLSVTGGTIPVLDQIPSVLLTILPYIFTILALVGFVGRSEAPKALGTPYEKGKR

Sequences:

>Translated_319_residues
MSFLDILAILVTGTLYTSAPIIFTALGGVFSERSGVVNIGLEGLMLFGAFIGVVTNLLMGDTWGTMTPWIALLFAAIGSG
LFALLHAVASITFRADQVVSGVAINFLSLGLTVFAIKKIFDKGQTDFIQYRIEKIDIPGLSDIPVLGKIFFSNVPITSYI
AIILAFVVWYVIYKTPFGLRLRAVGEHPMAADTMGINVYKMRYIGVCISGVFAGIGGAIFAMSISNNFSGATITGQGFLA
LAAMIFGKWNPLGALGAALFFGFAQSLSVTGGTIPVLDQIPSVLLTILPYIFTILALVGFVGRSEAPKALGTPYEKGKR
>Mature_318_residues
SFLDILAILVTGTLYTSAPIIFTALGGVFSERSGVVNIGLEGLMLFGAFIGVVTNLLMGDTWGTMTPWIALLFAAIGSGL
FALLHAVASITFRADQVVSGVAINFLSLGLTVFAIKKIFDKGQTDFIQYRIEKIDIPGLSDIPVLGKIFFSNVPITSYIA
IILAFVVWYVIYKTPFGLRLRAVGEHPMAADTMGINVYKMRYIGVCISGVFAGIGGAIFAMSISNNFSGATITGQGFLAL
AAMIFGKWNPLGALGAALFFGFAQSLSVTGGTIPVLDQIPSVLLTILPYIFTILALVGFVGRSEAPKALGTPYEKGKR

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33877; Mature: 33745

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLDILAILVTGTLYTSAPIIFTALGGVFSERSGVVNIGLEGLMLFGAFIGVVTNLLMG
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHC
DTWGTMTPWIALLFAAIGSGLFALLHAVASITFRADQVVSGVAINFLSLGLTVFAIKKIF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKGQTDFIQYRIEKIDIPGLSDIPVLGKIFFSNVPITSYIAIILAFVVWYVIYKTPFGLR
HCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
LRAVGEHPMAADTMGINVYKMRYIGVCISGVFAGIGGAIFAMSISNNFSGATITGQGFLA
EEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCEEECCHHHH
LAAMIFGKWNPLGALGAALFFGFAQSLSVTGGTIPVLDQIPSVLLTILPYIFTILALVGF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VGRSEAPKALGTPYEKGKR
HCCCCCCHHCCCCHHCCCC
>Mature Secondary Structure 
SFLDILAILVTGTLYTSAPIIFTALGGVFSERSGVVNIGLEGLMLFGAFIGVVTNLLMG
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHC
DTWGTMTPWIALLFAAIGSGLFALLHAVASITFRADQVVSGVAINFLSLGLTVFAIKKIF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKGQTDFIQYRIEKIDIPGLSDIPVLGKIFFSNVPITSYIAIILAFVVWYVIYKTPFGLR
HCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
LRAVGEHPMAADTMGINVYKMRYIGVCISGVFAGIGGAIFAMSISNNFSGATITGQGFLA
EEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCEEECCHHHH
LAAMIFGKWNPLGALGAALFFGFAQSLSVTGGTIPVLDQIPSVLLTILPYIFTILALVGF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VGRSEAPKALGTPYEKGKR
HCCCCCCHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]