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The map label for this gene is yufP [H]

Identifier: 218235403

GI number: 218235403

Start: 3805198

End: 3806256

Strand: Reverse

Name: yufP [H]

Synonym: BCB4264_A3888

Alternate gene names: 218235403

Gene position: 3806256-3805198 (Counterclockwise)

Preceding gene: 218235812

Following gene: 218234522

Centisome position: 70.24

GC content: 39.66

Gene sequence:

>1059_bases
ATGGCTAAAAAGCTTTTAACAGAACGAACGATAAATATTTTAGTCCCAGTACTATCCGTTATTTTCGGCTTACTTGTAGG
AGCGATTGTAATGCTAGTTAGTGGCTATGATCCAATTGTTGGTTATAGTGCACTTTGGACAGGAATGTTCGGCAGCGCAA
GTGCGATTGGTGAAACGCTTCGTACAATGATACCGCTTATTCTTGCTGGCTTATCGGTGGCGTTTGCATTTCGTACAGGT
TTATTTAATATCGGGGTAGAGGGTCAATTGTTAGTTGGTTGGCTTGCAGCGGTTTGGTTCGGTTATGCAGTCTCACTACC
AGCTTTCCTTCATATTCCATTATCTATTTTATTTGCAGCATTGGTGGGCGGAATTTGGGGCTTCATTCCGGGATATTTAA
AAGGGAAGTTTCAAGTGAATGAAGTTATTGTAACTATTATGATGAACTATATCGCGTTGTATGTAACGTATGACATCATT
AAGCGTTTCTTACATGCGGGTAATGACAAAACGTATGATATTAAAGAGAGTGCGTCACTATCTTCAGACTGGCTTGCTTC
TATTACTGATGGTTCACGTCTACATTGGGGAATTATTGTAGCAATTTTAATCGCTATTTTAATGTGGTTCTTATTAGATC
GAACAACTTTAGGTTACGAATTAAAGTCAGTAGGATTTAATCAGCATGCTTCTCAATATGCAGGTATGAAAGTTTCTCGT
AATGTAGTATTCTCCATGACAATTGCTGGTGCATTTGCGGGGATTGGTGGAGCGATGGAAGGATTAGGGACATTCCAGAG
TATGACAGCGATGTCTTCGTTTACAGGAGTAGGATTTGATGGGATTGCCGTAGCATTACTTGGAGGGAATAATCCGTTTG
GTATAATCCTTTCAGCTTTATTATTTGGTGGTTTGAAAAGTGCTTCCCCTCAAATGAACTTTGAGGCAGATGTACCGTCA
GAGCTTATTAATGTAATTATTGCATGTATCATCTTCTTTGTTGCATGTAGTTATGTGTTAAGATGGGCGCTTACACGCAT
GAGCAAGGAGGGGAAATAA

Upstream 100 bases:

>100_bases
GAAGGGGAAATTGTAGCAATAGTTGATGCGAAAGAAACGAATGAACAACAGCTTGGATTGTTAATGGCTGGAGGAACAAA
GAAGGAGCAGGTGGGTACAA

Downstream 100 bases:

>100_bases
ATGAGCTTTTTAGATATATTAGCCATTCTTGTGACGGGTACGTTATATACATCGGCACCTATCATTTTCACAGCACTAGG
TGGTGTATTTAGTGAACGAT

Product: sugar ABC transporter, permease protein

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MAKKLLTERTINILVPVLSVIFGLLVGAIVMLVSGYDPIVGYSALWTGMFGSASAIGETLRTMIPLILAGLSVAFAFRTG
LFNIGVEGQLLVGWLAAVWFGYAVSLPAFLHIPLSILFAALVGGIWGFIPGYLKGKFQVNEVIVTIMMNYIALYVTYDII
KRFLHAGNDKTYDIKESASLSSDWLASITDGSRLHWGIIVAILIAILMWFLLDRTTLGYELKSVGFNQHASQYAGMKVSR
NVVFSMTIAGAFAGIGGAMEGLGTFQSMTAMSSFTGVGFDGIAVALLGGNNPFGIILSALLFGGLKSASPQMNFEADVPS
ELINVIIACIIFFVACSYVLRWALTRMSKEGK

Sequences:

>Translated_352_residues
MAKKLLTERTINILVPVLSVIFGLLVGAIVMLVSGYDPIVGYSALWTGMFGSASAIGETLRTMIPLILAGLSVAFAFRTG
LFNIGVEGQLLVGWLAAVWFGYAVSLPAFLHIPLSILFAALVGGIWGFIPGYLKGKFQVNEVIVTIMMNYIALYVTYDII
KRFLHAGNDKTYDIKESASLSSDWLASITDGSRLHWGIIVAILIAILMWFLLDRTTLGYELKSVGFNQHASQYAGMKVSR
NVVFSMTIAGAFAGIGGAMEGLGTFQSMTAMSSFTGVGFDGIAVALLGGNNPFGIILSALLFGGLKSASPQMNFEADVPS
ELINVIIACIIFFVACSYVLRWALTRMSKEGK
>Mature_351_residues
AKKLLTERTINILVPVLSVIFGLLVGAIVMLVSGYDPIVGYSALWTGMFGSASAIGETLRTMIPLILAGLSVAFAFRTGL
FNIGVEGQLLVGWLAAVWFGYAVSLPAFLHIPLSILFAALVGGIWGFIPGYLKGKFQVNEVIVTIMMNYIALYVTYDIIK
RFLHAGNDKTYDIKESASLSSDWLASITDGSRLHWGIIVAILIAILMWFLLDRTTLGYELKSVGFNQHASQYAGMKVSRN
VVFSMTIAGAFAGIGGAMEGLGTFQSMTAMSSFTGVGFDGIAVALLGGNNPFGIILSALLFGGLKSASPQMNFEADVPSE
LINVIIACIIFFVACSYVLRWALTRMSKEGK

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37833; Mature: 37702

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKLLTERTINILVPVLSVIFGLLVGAIVMLVSGYDPIVGYSALWTGMFGSASAIGETL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH
RTMIPLILAGLSVAFAFRTGLFNIGVEGQLLVGWLAAVWFGYAVSLPAFLHIPLSILFAA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGGIWGFIPGYLKGKFQVNEVIVTIMMNYIALYVTYDIIKRFLHAGNDKTYDIKESASL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHCCC
SSDWLASITDGSRLHWGIIVAILIAILMWFLLDRTTLGYELKSVGFNQHASQYAGMKVSR
CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHCCCCHHHHHHCCCEECC
NVVFSMTIAGAFAGIGGAMEGLGTFQSMTAMSSFTGVGFDGIAVALLGGNNPFGIILSAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCHHHHHHHH
LFGGLKSASPQMNFEADVPSELINVIIACIIFFVACSYVLRWALTRMSKEGK
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKKLLTERTINILVPVLSVIFGLLVGAIVMLVSGYDPIVGYSALWTGMFGSASAIGETL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH
RTMIPLILAGLSVAFAFRTGLFNIGVEGQLLVGWLAAVWFGYAVSLPAFLHIPLSILFAA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGGIWGFIPGYLKGKFQVNEVIVTIMMNYIALYVTYDIIKRFLHAGNDKTYDIKESASL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHCCC
SSDWLASITDGSRLHWGIIVAILIAILMWFLLDRTTLGYELKSVGFNQHASQYAGMKVSR
CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHCCCCHHHHHHCCCEECC
NVVFSMTIAGAFAGIGGAMEGLGTFQSMTAMSSFTGVGFDGIAVALLGGNNPFGIILSAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCHHHHHHHH
LFGGLKSASPQMNFEADVPSELINVIIACIIFFVACSYVLRWALTRMSKEGK
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]