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The map label for this gene is 218234249

Identifier: 218234249

GI number: 218234249

Start: 3276555

End: 3277124

Strand: Reverse

Name: 218234249

Synonym: BCB4264_A3396

Alternate gene names: NA

Gene position: 3277124-3276555 (Counterclockwise)

Preceding gene: 218232159

Following gene: 218232042

Centisome position: 60.47

GC content: 32.28

Gene sequence:

>570_bases
GTGAAGTTTGGATTTGATATCGATGATACATTAATTGATTTAAGGCAGCATGCTTTTCATTTATATAATAAGAAATTAAA
CAAAAAAGTAGGGTTGGATGTATTCCATTCTTTAAAAACAATTGAAATTCATGAAGCATTTGGCATGACTTCGGAGGAAG
GCGGTCATATGTGGAATAGTTTGCTGGATGAGATTTATTATACTTCTTGTTCACCGTTTCCGTATGCTGTAGAGACATTG
CAAGAATTAGAAAGACAGGGACATGAAATTTACTATATAACGGCGCGACCTAAAGAGCATGGAGAGCAAACAAAAAAATG
GTTAATAGAAAAAGGATTTCCGGTACATGAAGATCGCTTTTTCTATGGAATGAAGGATGAAGAAAAAATACACTTCATAC
AAGAAATAAAATTAAACTATTTCTTTGATGATAAGCCGGCTGTTTTAGAAACGTTAATAGGAAAACCGATAAATGTATAT
GCAAAAACTACTTCTTACAATCAATATCTCAATATCCCGCGTATTAAAAATTGGATGGAGTTAGGAGATATTATAAAGAA
AGATATGTGA

Upstream 100 bases:

>100_bases
GATTTATTGGCTATCCAGCATATCGGAAAGATGAGAAATAAGGGGAATAAAAACTACTTATATGTTCCGATAAATGGATT
GCAGAAAGGAGCGATGAAGA

Downstream 100 bases:

>100_bases
GGATTTAAATGGAAAATCAAATAGAGCCAAGAGCATATTGAGTATTACAATTTTAGAGGAAAGACATACGTATTATGTCT
TTCCTTATTTTTTAATACTA

Product: putative nucleotidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKFGFDIDDTLIDLRQHAFHLYNKKLNKKVGLDVFHSLKTIEIHEAFGMTSEEGGHMWNSLLDEIYYTSCSPFPYAVETL
QELERQGHEIYYITARPKEHGEQTKKWLIEKGFPVHEDRFFYGMKDEEKIHFIQEIKLNYFFDDKPAVLETLIGKPINVY
AKTTSYNQYLNIPRIKNWMELGDIIKKDM

Sequences:

>Translated_189_residues
MKFGFDIDDTLIDLRQHAFHLYNKKLNKKVGLDVFHSLKTIEIHEAFGMTSEEGGHMWNSLLDEIYYTSCSPFPYAVETL
QELERQGHEIYYITARPKEHGEQTKKWLIEKGFPVHEDRFFYGMKDEEKIHFIQEIKLNYFFDDKPAVLETLIGKPINVY
AKTTSYNQYLNIPRIKNWMELGDIIKKDM
>Mature_189_residues
MKFGFDIDDTLIDLRQHAFHLYNKKLNKKVGLDVFHSLKTIEIHEAFGMTSEEGGHMWNSLLDEIYYTSCSPFPYAVETL
QELERQGHEIYYITARPKEHGEQTKKWLIEKGFPVHEDRFFYGMKDEEKIHFIQEIKLNYFFDDKPAVLETLIGKPINVY
AKTTSYNQYLNIPRIKNWMELGDIIKKDM

Specific function: Unknown

COG id: COG5663

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5'(3')-deoxyribonucleotidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010708
- InterPro:   IPR023214
- InterPro:   IPR009206 [H]

Pfam domain/function: PF06941 NT5C [H]

EC number: NA

Molecular weight: Translated: 22462; Mature: 22462

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFGFDIDDTLIDLRQHAFHLYNKKLNKKVGLDVFHSLKTIEIHEAFGMTSEEGGHMWNS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEHHHHCCCCCCCHHHHHH
LLDEIYYTSCSPFPYAVETLQELERQGHEIYYITARPKEHGEQTKKWLIEKGFPVHEDRF
HHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCE
FYGMKDEEKIHFIQEIKLNYFFDDKPAVLETLIGKPINVYAKTTSYNQYLNIPRIKNWME
EECCCCCHHHHHHHHHHHHEEECCCHHHHHHHHCCCEEEEEEECCCHHHCCCHHHHHHHH
LGDIIKKDM
HHHHHHHCC
>Mature Secondary Structure
MKFGFDIDDTLIDLRQHAFHLYNKKLNKKVGLDVFHSLKTIEIHEAFGMTSEEGGHMWNS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEHHHHCCCCCCCHHHHHH
LLDEIYYTSCSPFPYAVETLQELERQGHEIYYITARPKEHGEQTKKWLIEKGFPVHEDRF
HHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCE
FYGMKDEEKIHFIQEIKLNYFFDDKPAVLETLIGKPINVYAKTTSYNQYLNIPRIKNWME
EECCCCCHHHHHHHHHHHHEEECCCHHHHHHHHCCCEEEEEEECCCHHHCCCHHHHHHHH
LGDIIKKDM
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721630 [H]