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The map label for this gene is yvmB [H]

Identifier: 218234201

GI number: 218234201

Start: 777827

End: 778288

Strand: Direct

Name: yvmB [H]

Synonym: BCB4264_A0802

Alternate gene names: 218234201

Gene position: 777827-778288 (Clockwise)

Preceding gene: 218230953

Following gene: 218234121

Centisome position: 14.35

GC content: 33.98

Gene sequence:

>462_bases
TTGAAGCATGCAACGAAGCAAATGGAAATACTTTCGGACATTCGTACACTTTTGCATAAAAAAGAAGAACATTTAAAACG
ACAAAATGAGAAGTTTCTTCGTGAGACAGGCGTAAGTAGTATGTCTTTATCTGAGTTACATGTAATCGAATGTATCGGAA
AAAATGGTTTGATGAATGTAACGGCAATTACGACAGAAATGGGCATGACGAAGGGAGCAATCTCTAAAATTTGTACAAAG
TTGTTTCAAAAGCAATTCGTTGAGAAGATGCAAATGTTAGATAATCAAAAAGAAATCTTCTTCAGCTTAACGGAGAGTGG
GAATGAAATATATAAAGCTCATGAAAAATTGCATAAGCAAGCTGAAGAAAAGTGGTTGTTACTTTTAGATGGATATACGA
AAGAAGAGCAAGACTTTATTCAAAGGTTTATAAAGGATGTCTCCGGTCATTTGGAAATATAA

Upstream 100 bases:

>100_bases
ATTTATTTTAACATGATTTTCTTACTTGTAAAGATGAAAAAATGGTTTTAAAATGGTATATAGTTAAATTGTTTCTTTGG
AAACTTAGGAGGCGAACGGA

Downstream 100 bases:

>100_bases
TTGGAAGAAAAAACTCCTTTTTCTCAAGGCTTTTAAATATAATTTCTGAAAGAACTCATATATAATAGAAAAAGATACTT
AACATGGTGAATAATTAAAG

Product: transcriptional regulator, MarR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKHATKQMEILSDIRTLLHKKEEHLKRQNEKFLRETGVSSMSLSELHVIECIGKNGLMNVTAITTEMGMTKGAISKICTK
LFQKQFVEKMQMLDNQKEIFFSLTESGNEIYKAHEKLHKQAEEKWLLLLDGYTKEEQDFIQRFIKDVSGHLEI

Sequences:

>Translated_153_residues
MKHATKQMEILSDIRTLLHKKEEHLKRQNEKFLRETGVSSMSLSELHVIECIGKNGLMNVTAITTEMGMTKGAISKICTK
LFQKQFVEKMQMLDNQKEIFFSLTESGNEIYKAHEKLHKQAEEKWLLLLDGYTKEEQDFIQRFIKDVSGHLEI
>Mature_153_residues
MKHATKQMEILSDIRTLLHKKEEHLKRQNEKFLRETGVSSMSLSELHVIECIGKNGLMNVTAITTEMGMTKGAISKICTK
LFQKQFVEKMQMLDNQKEIFFSLTESGNEIYKAHEKLHKQAEEKWLLLLDGYTKEEQDFIQRFIKDVSGHLEI

Specific function: Involved in protein secretion [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17844; Mature: 17844

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHATKQMEILSDIRTLLHKKEEHLKRQNEKFLRETGVSSMSLSELHVIECIGKNGLMNV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHH
TAITTEMGMTKGAISKICTKLFQKQFVEKMQMLDNQKEIFFSLTESGNEIYKAHEKLHKQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHH
AEEKWLLLLDGYTKEEQDFIQRFIKDVSGHLEI
HHHCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKHATKQMEILSDIRTLLHKKEEHLKRQNEKFLRETGVSSMSLSELHVIECIGKNGLMNV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHH
TAITTEMGMTKGAISKICTKLFQKQFVEKMQMLDNQKEIFFSLTESGNEIYKAHEKLHKQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHH
AEEKWLLLLDGYTKEEQDFIQRFIKDVSGHLEI
HHHCEEEEECCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]