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The map label for this gene is yxbG [H]

Identifier: 218234198

GI number: 218234198

Start: 2469343

End: 2470059

Strand: Reverse

Name: yxbG [H]

Synonym: BCB4264_A2546

Alternate gene names: 218234198

Gene position: 2470059-2469343 (Counterclockwise)

Preceding gene: 218231677

Following gene: 218234187

Centisome position: 45.58

GC content: 35.56

Gene sequence:

>717_bases
ATGTCTATTACTACATTAAAAGATAGTCGTATCGTTATTATTGGCGGGAGTTCTGGTATTGGATTAGCAACGGCAAAACA
AGCAATTAAACAAGGCGCACATGTTATTATTGCAGGGCGTTCGAAAGAAAAATTAAAGATTGCTAAAAAATTAATAAATA
GCAATCGTCTCCAAACTTACGTATTGGATAATCAAAATAAAGAGCAATTACAAAATTTTTTCAAGACAGTTGGGAACTTT
GATCATTTATTCACACCGGGAGCCTCTTACACACTTGGACCAATTACCTCTACAGAGGAAATTGCTGAAAGTAGCTTCAT
CGGAAAGTTTTGGCCTCAATATTATGCCGTAAAATATGCAATTCCTTTTCTTTCAAACTCTGGATCGATTGTGTTAATGT
CTGGTGCATTTAGTCAAAGACCACTTAAAGGCGCACCTGCCTATGGAGCTTGCAATGGTGCTATTGAAAGTTTAGGGAAG
GCCTTAGCTGTGGAATTAGCTCCTATTAGAGTTAATGTGGTTTCTCCTGGAACAATACAAAGAGAAAATGAACAAAATGA
AAATAGACTAGTTGCTTACGAAGCTTATAAATCTCTTTCACTTGTACAACGAGCTGGATATAATGATGAAATTGCACATA
CTGTCCTATATTTAATGCAAAATAGTTTTACTACGGGTAATGTATTATTTCCTGATGGAGGGTACACATATCATTAA

Upstream 100 bases:

>100_bases
TATAAAGTGCGTACTTTTCACTTGCTACCTTTTAGCGAATAATAAAAACATAGCACAGTTAGTTATATTCTAAATTTTTT
ATTAAAGGAGTGGCTAAAAT

Downstream 100 bases:

>100_bases
ATTATTTAAGACAAAAGCCCCTTATTACGGTGGCTTTTGTTGCTAATGTAAACATTGCTGAAATTTCCAAAAAGATGGTT
GCATTTCTTTATTACCAACA

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSITTLKDSRIVIIGGSSGIGLATAKQAIKQGAHVIIAGRSKEKLKIAKKLINSNRLQTYVLDNQNKEQLQNFFKTVGNF
DHLFTPGASYTLGPITSTEEIAESSFIGKFWPQYYAVKYAIPFLSNSGSIVLMSGAFSQRPLKGAPAYGACNGAIESLGK
ALAVELAPIRVNVVSPGTIQRENEQNENRLVAYEAYKSLSLVQRAGYNDEIAHTVLYLMQNSFTTGNVLFPDGGYTYH

Sequences:

>Translated_238_residues
MSITTLKDSRIVIIGGSSGIGLATAKQAIKQGAHVIIAGRSKEKLKIAKKLINSNRLQTYVLDNQNKEQLQNFFKTVGNF
DHLFTPGASYTLGPITSTEEIAESSFIGKFWPQYYAVKYAIPFLSNSGSIVLMSGAFSQRPLKGAPAYGACNGAIESLGK
ALAVELAPIRVNVVSPGTIQRENEQNENRLVAYEAYKSLSLVQRAGYNDEIAHTVLYLMQNSFTTGNVLFPDGGYTYH
>Mature_237_residues
SITTLKDSRIVIIGGSSGIGLATAKQAIKQGAHVIIAGRSKEKLKIAKKLINSNRLQTYVLDNQNKEQLQNFFKTVGNFD
HLFTPGASYTLGPITSTEEIAESSFIGKFWPQYYAVKYAIPFLSNSGSIVLMSGAFSQRPLKGAPAYGACNGAIESLGKA
LAVELAPIRVNVVSPGTIQRENEQNENRLVAYEAYKSLSLVQRAGYNDEIAHTVLYLMQNSFTTGNVLFPDGGYTYH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=238, Percent_Identity=27.7310924369748, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=25.8064516129032, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=28.0769230769231, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI2367365, Length=234, Percent_Identity=26.9230769230769, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789378, Length=241, Percent_Identity=26.1410788381743, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=27.1255060728745, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=244, Percent_Identity=27.8688524590164, Blast_Score=75, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6324126, Length=250, Percent_Identity=28, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=29.2, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24643142, Length=250, Percent_Identity=29.2, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21355319, Length=248, Percent_Identity=28.6290322580645, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21357041, Length=249, Percent_Identity=27.710843373494, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25933; Mature: 25802

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITTLKDSRIVIIGGSSGIGLATAKQAIKQGAHVIIAGRSKEKLKIAKKLINSNRLQTY
CCCEEECCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEEE
VLDNQNKEQLQNFFKTVGNFDHLFTPGASYTLGPITSTEEIAESSFIGKFWPQYYAVKYA
EECCCCHHHHHHHHHHHCCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHEEEEEE
IPFLSNSGSIVLMSGAFSQRPLKGAPAYGACNGAIESLGKALAVELAPIRVNVVSPGTIQ
EEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEEEEEECCCCEE
RENEQNENRLVAYEAYKSLSLVQRAGYNDEIAHTVLYLMQNSFTTGNVLFPDGGYTYH
CCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
SITTLKDSRIVIIGGSSGIGLATAKQAIKQGAHVIIAGRSKEKLKIAKKLINSNRLQTY
CCEEECCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEEE
VLDNQNKEQLQNFFKTVGNFDHLFTPGASYTLGPITSTEEIAESSFIGKFWPQYYAVKYA
EECCCCHHHHHHHHHHHCCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHEEEEEE
IPFLSNSGSIVLMSGAFSQRPLKGAPAYGACNGAIESLGKALAVELAPIRVNVVSPGTIQ
EEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEEEEEECCCCEE
RENEQNENRLVAYEAYKSLSLVQRAGYNDEIAHTVLYLMQNSFTTGNVLFPDGGYTYH
CCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]