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The map label for this gene is fliN [C]

Identifier: 218234143

GI number: 218234143

Start: 1645385

End: 1645744

Strand: Direct

Name: fliN [C]

Synonym: BCB4264_A1730

Alternate gene names: 218234143

Gene position: 1645385-1645744 (Clockwise)

Preceding gene: 218233573

Following gene: 218232378

Centisome position: 30.36

GC content: 37.22

Gene sequence:

>360_bases
ATGAAGCATGAAGTATCTCCCGTGTCATTAATGGGATTAGAAGATTTTGCAGGAAAGCGAAATGAAGCAGGTAAGGCACA
TATTGATACTGTTTCAGATATTTCGATTGAACTCGGTGTAAAGCTTGGAAAGTCATCTATTACACTTGGTGATGTAAAGC
AGTTAAAAGTTGGCGATGTTCTGGAAGTAGAGAAAAACTTAGGACATAAAGTAGATGTGTATTTAAGTAATATGAAAGTC
GGCATCGGTGAAGCAATCGTAATGGACGAGAAATTCGGTATTATCATTTCTGAAATTGAAGCTGATAAGAAACAAGCGGC
GCTTATGAAAGCCCAAAGTCAAATGCAAGATAAAGAGTAG

Upstream 100 bases:

>100_bases
GGTTATGTAGATGGAAAGCATAAATTTAATTGTTTTATTGGAAAAGATGGAACGCGTAAGGCGCTCCTATTTAAAAGTTT
TGTAGAGTAGGAGGATCCAT

Downstream 100 bases:

>100_bases
AGGAGGAGTCATATGTCGTATATGACGACCTTATTTCAAGTCGTTTTACTGTTTGGTGCGCTCGGTTACGGTGCATATTA
TATGACGAAAAAGACGCGCA

Product: flagellar motor switch protein

Products: NA

Alternate protein names: Flagellar Motor Switch Protein FliN; Flagellar Motor Switch Protein

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKHEVSPVSLMGLEDFAGKRNEAGKAHIDTVSDISIELGVKLGKSSITLGDVKQLKVGDVLEVEKNLGHKVDVYLSNMKV
GIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE

Sequences:

>Translated_119_residues
MKHEVSPVSLMGLEDFAGKRNEAGKAHIDTVSDISIELGVKLGKSSITLGDVKQLKVGDVLEVEKNLGHKVDVYLSNMKV
GIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE
>Mature_119_residues
MKHEVSPVSLMGLEDFAGKRNEAGKAHIDTVSDISIELGVKLGKSSITLGDVKQLKVGDVLEVEKNLGHKVDVYLSNMKV
GIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE

Specific function: Flin Is One Of Three Proteins (Flig, Flin, Flim) That Form A Switch Complex That Is Proposed To Be Located At The Base Of The Basal Body. This Complex Interacts With The Chey And Chez Chemotaxis Proteins, In Addition To Contacting Components Of The Motor

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12924; Mature: 12924

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHEVSPVSLMGLEDFAGKRNEAGKAHIDTVSDISIELGVKLGKSSITLGDVKQLKVGDV
CCCCCCCEEEECCHHHCCCCCCCCCEECCCCCCCEEEEEEEECCCCCEECCCCCCCCCCH
LEVEKNLGHKVDVYLSNMKVGIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE
HHHHHCCCCEEEEEEECEEECCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKHEVSPVSLMGLEDFAGKRNEAGKAHIDTVSDISIELGVKLGKSSITLGDVKQLKVGDV
CCCCCCCEEEECCHHHCCCCCCCCCEECCCCCCCEEEEEEEECCCCCEECCCCCCCCCCH
LEVEKNLGHKVDVYLSNMKVGIGEAIVMDEKFGIIISEIEADKKQAALMKAQSQMQDKE
HHHHHCCCCEEEEEEECEEECCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA