Click here to switch to the map view.

The map label for this gene is yrhG [H]

Identifier: 218233960

GI number: 218233960

Start: 3588895

End: 3589716

Strand: Reverse

Name: yrhG [H]

Synonym: BCB4264_A3676

Alternate gene names: 218233960

Gene position: 3589716-3588895 (Counterclockwise)

Preceding gene: 218234531

Following gene: 218234160

Centisome position: 66.24

GC content: 39.05

Gene sequence:

>822_bases
TTGAAGCTGCTTTTTTATTTGGAGAAAATGGAGGAATGGGTAATGGCATTTCATAAGCCGGAACAAATTGCTGAGCTTGT
CATTGAGGCCGGTGTTCAAAAAGTAAGACAGACATTGCCAGCGATGCTTATTCTCGGTTTTTTAGGAGGAGCGTTTATTG
CGATAGGTTTTTTACTTAACATTCGAGTTTTAGGGAATTTACCTGAGCGCTGGGGAAGTCTAGTGAATGTTTTAGGAGGA
GCAGTATTTCCTGTTGGACTCATGCTCGTAGTATTAGCAGGAGGAGAATTAATTACGGGAAATATGATGTCACTGTCTAT
GGCGCTTTATGCAAAGAAAATTACATTGATAAGTGTACTGAATAACTGGGTTTGGATTACTCTCATGAACTTTATTGGGG
CAATTTTCGTTGCGTATTGCTTTGGACATCTTGGCGGATTAACAGAGGGAGAGTATTTAAATAAAACGGTAGCGATAGCG
GAAGGGAAGTTACATGAATCATTTGGGAGAACTTTGATTTTAGCAATTGGGTGTAATTGGCTCGTTTGTCTTGCTCTTTG
GCTCGCTTACGGGACGAGTGATTTTGTCGGGAAAATCATCGGAATTTGGATTCCAATTATGGCATTTGTAGTGATTGGAT
TTCAGCAAGTAGTAGCAAATATGTTTGTCATTTCCGCTGTTATTTTTGCTGGTCATCTAACGTGGATGGATCTGGCTAAA
AATTTTGTTCCTGTTTTTATCGGAAATGTAATTGGAGGAGCTGGGTTTGTTGGTTTTGCTTACTTTGCTTGTTATCAGAA
ACAACATTCTAATATGAAATAG

Upstream 100 bases:

>100_bases
GGATTTTCTATTTTATAGTAAAAGTGATGATTGATATCTCTGTAAAAGATGTGCAGAGAAATTAAGCAGCATTCAAAAAC
CTTTATTTTGAGGAGGTTTT

Downstream 100 bases:

>100_bases
AGTTCTTGAGAGGAAGGGTATGTAATGGCTGATCGGTATTCACGACAACAGTTGTTCAAACCAATTGGGAGTAAAGGACA
AGAAAAAATTCGAAATAAAC

Product: putative formate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKLLFYLEKMEEWVMAFHKPEQIAELVIEAGVQKVRQTLPAMLILGFLGGAFIAIGFLLNIRVLGNLPERWGSLVNVLGG
AVFPVGLMLVVLAGGELITGNMMSLSMALYAKKITLISVLNNWVWITLMNFIGAIFVAYCFGHLGGLTEGEYLNKTVAIA
EGKLHESFGRTLILAIGCNWLVCLALWLAYGTSDFVGKIIGIWIPIMAFVVIGFQQVVANMFVISAVIFAGHLTWMDLAK
NFVPVFIGNVIGGAGFVGFAYFACYQKQHSNMK

Sequences:

>Translated_273_residues
MKLLFYLEKMEEWVMAFHKPEQIAELVIEAGVQKVRQTLPAMLILGFLGGAFIAIGFLLNIRVLGNLPERWGSLVNVLGG
AVFPVGLMLVVLAGGELITGNMMSLSMALYAKKITLISVLNNWVWITLMNFIGAIFVAYCFGHLGGLTEGEYLNKTVAIA
EGKLHESFGRTLILAIGCNWLVCLALWLAYGTSDFVGKIIGIWIPIMAFVVIGFQQVVANMFVISAVIFAGHLTWMDLAK
NFVPVFIGNVIGGAGFVGFAYFACYQKQHSNMK
>Mature_273_residues
MKLLFYLEKMEEWVMAFHKPEQIAELVIEAGVQKVRQTLPAMLILGFLGGAFIAIGFLLNIRVLGNLPERWGSLVNVLGG
AVFPVGLMLVVLAGGELITGNMMSLSMALYAKKITLISVLNNWVWITLMNFIGAIFVAYCFGHLGGLTEGEYLNKTVAIA
EGKLHESFGRTLILAIGCNWLVCLALWLAYGTSDFVGKIIGIWIPIMAFVVIGFQQVVANMFVISAVIFAGHLTWMDLAK
NFVPVFIGNVIGGAGFVGFAYFACYQKQHSNMK

Specific function: Involved In The Bidirectional Transport Of Formate (By Similarity). [C]

COG id: COG2116

COG function: function code P; Formate/nitrite family of transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FNT transporter (TC 2.A.44) family [H]

Homologues:

Organism=Escherichia coli, GI1788837, Length=276, Percent_Identity=31.1594202898551, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787132, Length=282, Percent_Identity=29.0780141843972, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87082249, Length=233, Percent_Identity=32.618025751073, Blast_Score=87, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6321779, Length=253, Percent_Identity=31.2252964426877, Blast_Score=109, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000292 [H]

Pfam domain/function: PF01226 Form_Nir_trans [H]

EC number: NA

Molecular weight: Translated: 29921; Mature: 29921

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS01005 FORMATE_NITRITE_TP_1 ; PS01006 FORMATE_NITRITE_TP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLFYLEKMEEWVMAFHKPEQIAELVIEAGVQKVRQTLPAMLILGFLGGAFIAIGFLLN
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRVLGNLPERWGSLVNVLGGAVFPVGLMLVVLAGGELITGNMMSLSMALYAKKITLISVL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHH
NNWVWITLMNFIGAIFVAYCFGHLGGLTEGEYLNKTVAIAEGKLHESFGRTLILAIGCNW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCEEHHHHHHHH
LVCLALWLAYGTSDFVGKIIGIWIPIMAFVVIGFQQVVANMFVISAVIFAGHLTWMDLAK
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFVPVFIGNVIGGAGFVGFAYFACYQKQHSNMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]