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The map label for this gene is yhdP [H]

Identifier: 218233762

GI number: 218233762

Start: 631789

End: 633087

Strand: Direct

Name: yhdP [H]

Synonym: BCB4264_A0646

Alternate gene names: 218233762

Gene position: 631789-633087 (Clockwise)

Preceding gene: 218234347

Following gene: 218231023

Centisome position: 11.66

GC content: 33.95

Gene sequence:

>1299_bases
GTGGATATTTTAAAATTATTGATGGTAGTCATTCTTATTGGGTTAACAGCATTTTTTGTGGCTGTTGAATTTGCAATTAT
TAAGGTACGTAGCAGTCGTATTGATCAACTCGTTAGCGAAAAAAGACGAGGTGCACTGGCAGCTAAAAAGGTAACTTCAA
ATTTAGATGAATATTTATCGGCCTGTCAGCTAGGTATTACAATTACTGCTTTAGGGCTTGGGTGGTTAGGGGAACCAACC
ATTAAACATTTACTCGAGCCGTTGTTTTTAAAATTAAAATTCTCACCTGCAATTTCCAGTACAGTTTCATTTATTATTGC
CTTTGCAGTAATTACATTTTTACATGTTGTCATTGGGGAACTTGCTCCAAAGACATTTGCTATACAAAAAGCAGAACAAG
TTAGCTTATTGTTATCGAAACCACTTATTTATTTTTACCGAGTTATGTATCCGTTTATTTGGGCTTTGAATGGTTCAGCG
AGGGTTGTAACTGGTTTATTCGGATTACATCCAGCTTCTGAACATGAAGTAGCTCATTCAGAAGAAGAATTAAGGTTAAT
CTTATCTGAGAGCTATGAGAGCGGAGAGATTAACCAAAGGGAATTTAAATATGTAAATAATATTTTTGAATTTGATAATA
GAGTAGCAAAAGAAATTATGGTACCTCGTACGGAAGTTGTAGGCTTATATGAGGACGAACCATTTGAAACACATATTAAA
GTAATCGCGCAAGAAAAGTACACGAGATATCCTGTATTTGGTGAAGATAAAGATGAAATTATTGGGATGGTTAATGTAAA
AGATTTATTTATTCGTTATATGGATGGTAATCGGGATGAGGAGTGCTCAATTATGCCATATACAAGGCCAGTTATTGAAG
TGCTAGAAAATATTCCAATTCATGATTTACTATTACAAATGCAAAGAAAACACATTCCATTAGCTGTATTGTATGATGAA
TATGGTGGTACAGCTGGGATTGTTACACTAGAAGATATTTTAGAAGAAATTGTTGGAGAAATTCGAGATGAATACGATGA
AGATGAGAATCCCCCTATAGAGCATATAAGTGAAGGTTATAAAATCGTAGAGGGAAAAGTGCTTATTAGTGAAGTAAATG
ATTTGCTTGGCATACATTTAATTGCTGATGATGTAGATACAATTGGTGGCTGGATTATGGTACAAAAACAAATCGTTGCT
GAAGGAGATATTATTGAGAAACACGGTTTTTATTTTAAAGTCCTTGAAAAGGATATGCATCAAATTAAACGAGTGGAAAT
AAGGAAAGTAGAAGAATGA

Upstream 100 bases:

>100_bases
GGATTTTATATAGAGTTGCTGTCCAATAATTGAAGAAACTAAAGTGAAACTTCTTTTTAAAAGGAGGTGTAACTTTAGCT
AAGAAAGCTAAAGAGCATAT

Downstream 100 bases:

>100_bases
TTTTCTATAAACTTTAATAAAAAGGATATACAGAAAAATAAATGTTTGCGCTTTCAAAAAAGGTGCTATATAGTGAAGGT
GGATACTGAAAAATTCTTCT

Product: magnesium and cobalt efflux protein CorC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MDILKLLMVVILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLSACQLGITITALGLGWLGEPT
IKHLLEPLFLKLKFSPAISSTVSFIIAFAVITFLHVVIGELAPKTFAIQKAEQVSLLLSKPLIYFYRVMYPFIWALNGSA
RVVTGLFGLHPASEHEVAHSEEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVVGLYEDEPFETHIK
VIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSIMPYTRPVIEVLENIPIHDLLLQMQRKHIPLAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDENPPIEHISEGYKIVEGKVLISEVNDLLGIHLIADDVDTIGGWIMVQKQIVA
EGDIIEKHGFYFKVLEKDMHQIKRVEIRKVEE

Sequences:

>Translated_432_residues
MDILKLLMVVILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLSACQLGITITALGLGWLGEPT
IKHLLEPLFLKLKFSPAISSTVSFIIAFAVITFLHVVIGELAPKTFAIQKAEQVSLLLSKPLIYFYRVMYPFIWALNGSA
RVVTGLFGLHPASEHEVAHSEEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVVGLYEDEPFETHIK
VIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSIMPYTRPVIEVLENIPIHDLLLQMQRKHIPLAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDENPPIEHISEGYKIVEGKVLISEVNDLLGIHLIADDVDTIGGWIMVQKQIVA
EGDIIEKHGFYFKVLEKDMHQIKRVEIRKVEE
>Mature_432_residues
MDILKLLMVVILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLSACQLGITITALGLGWLGEPT
IKHLLEPLFLKLKFSPAISSTVSFIIAFAVITFLHVVIGELAPKTFAIQKAEQVSLLLSKPLIYFYRVMYPFIWALNGSA
RVVTGLFGLHPASEHEVAHSEEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVVGLYEDEPFETHIK
VIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSIMPYTRPVIEVLENIPIHDLLLQMQRKHIPLAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDENPPIEHISEGYKIVEGKVLISEVNDLLGIHLIADDVDTIGGWIMVQKQIVA
EGDIIEKHGFYFKVLEKDMHQIKRVEIRKVEE

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=387, Percent_Identity=48.8372093023256, Blast_Score=377, Evalue=1e-105,
Organism=Escherichia coli, GI1790664, Length=433, Percent_Identity=23.5565819861432, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI145693175, Length=416, Percent_Identity=24.0384615384615, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1786879, Length=257, Percent_Identity=30.3501945525292, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI87082033, Length=234, Percent_Identity=23.9316239316239, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1788119, Length=238, Percent_Identity=25.6302521008403, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17539402, Length=243, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 49197; Mature: 49197

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILKLLMVVILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ACQLGITITALGLGWLGEPTIKHLLEPLFLKLKFSPAISSTVSFIIAFAVITFLHVVIGE
HHHHCCEEEEECCCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
LAPKTFAIQKAEQVSLLLSKPLIYFYRVMYPFIWALNGSARVVTGLFGLHPASEHEVAHS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHCC
EEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVVGLYEDEPFETHIK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCHHHHHH
VIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSIMPYTRPVIEVLENIPI
HHHHHHHCCCCCCCCCHHHEEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCH
HDLLLQMQRKHIPLAVLYDEYGGTAGIVTLEDILEEIVGEIRDEYDEDENPPIEHISEGY
HHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC
KIVEGKVLISEVNDLLGIHLIADDVDTIGGWIMVQKQIVAEGDIIEKHGFYFKVLEKDMH
EEEECHHHHHHHHHHHEEEHEECCHHHHCCHHEEHHHHHCCCCEEHHCCCHHHHHHHHHH
QIKRVEIRKVEE
HHHHHHHHCCCC
>Mature Secondary Structure
MDILKLLMVVILIGLTAFFVAVEFAIIKVRSSRIDQLVSEKRRGALAAKKVTSNLDEYLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ACQLGITITALGLGWLGEPTIKHLLEPLFLKLKFSPAISSTVSFIIAFAVITFLHVVIGE
HHHHCCEEEEECCCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
LAPKTFAIQKAEQVSLLLSKPLIYFYRVMYPFIWALNGSARVVTGLFGLHPASEHEVAHS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHCC
EEELRLILSESYESGEINQREFKYVNNIFEFDNRVAKEIMVPRTEVVGLYEDEPFETHIK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCHHHHHH
VIAQEKYTRYPVFGEDKDEIIGMVNVKDLFIRYMDGNRDEECSIMPYTRPVIEVLENIPI
HHHHHHHCCCCCCCCCHHHEEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCH
HDLLLQMQRKHIPLAVLYDEYGGTAGIVTLEDILEEIVGEIRDEYDEDENPPIEHISEGY
HHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC
KIVEGKVLISEVNDLLGIHLIADDVDTIGGWIMVQKQIVAEGDIIEKHGFYFKVLEKDMH
EEEECHHHHHHHHHHHEEEHEECCHHHHCCHHEEHHHHHCCCCEEHHCCCHHHHHHHHHH
QIKRVEIRKVEE
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]