Click here to switch to the map view.

The map label for this gene is gbpA [H]

Identifier: 218233607

GI number: 218233607

Start: 2697274

End: 2698641

Strand: Reverse

Name: gbpA [H]

Synonym: BCB4264_A2803

Alternate gene names: 218233607

Gene position: 2698641-2697274 (Counterclockwise)

Preceding gene: 218232626

Following gene: 218234396

Centisome position: 49.8

GC content: 36.26

Gene sequence:

>1368_bases
ATGAATAATCGATTTTTAAAACAACTACAAAATATGAAAATGAACAAAAAAAGTTTAGGAGCTGTAGCATTAACAGCTGG
AATTATTAGTACGACACTTATTCCTCAAAATGCTTATGCGCACGGTTTTGTTGAAAAGCCTGGTAGCCGATCTGCTTTAT
GTAGTCCAACTTATGGTGCGCTAAATGTAAACTGTGGAAGTGTTATGTATGAACCACAAAGTTTAGAAGCTCCAAAAGGG
TTCCCACAAGGTGGTCCAGTAGATGGACAAATTGCTTCAGCAGGCGGAAAATTTGGTGGTATTTTAGATCAACAAACAGC
AAATCGTTGGTTTAAAAATACAATCACTGGTGGGGAAAATACATTTACTTGGAAGTATACTGCGCCTCACTTAACGAGTA
AGTGGCATTACTATATTACTAAAAAAGGATGGAATCCAAATAAAGCGCTAACAAGAGCAGATTTTGAACCAATTGGAACA
GTACAACATGATGGTTCTGCAGCTTCAAATAATTTAACTCATAAAATCAATGTACCTACTGATCGTAGTGGATATCATGT
GATTTTAGCAGTATGGGATGTAGCTGATACAGCAAATGCATTCTATAATGTAATTGATGTTAATCTTATTAATGATGTGA
AACCAGACATAGAAGCGCCAAGTATTCCAAATGGACTTCAGACGCAAAAAGTAACAGCGAATAGTGTAGAACTAACATGG
AACGCTTCTACGGATAATGTAGGGGTAAAAGGATATCAAATCTTCCGTAACGGAGAGATGATTGATACAGTACTAGGCAC
TCATTTTATTGATAAGAAATTACAACCAAGTACAGAATACTCTTATACTGTAAAAGCAATTGACGCAGCTGGAAATGTAT
CGAAAGAAAGTGCAGCGCTTACAGTAAAAACGACAGTTGAGACTCCTGATACAGAAGCACCAACACAACCAAAAGGATTA
CATAGTATGGGAACGACAGCGTCAAGTGTGGATTTAATGTGGAGTCCATCTGACGATAATATTGGTGTAGACCATTATGA
TATTTATAGAGAAACAGAAGGGGCAATGAAAAAGATTGCAACATCCAATACAACTTCTTATTTGGATAAAAATCTGCTCG
CTAATACTACTTATAAATATGTAGTGAAAGCTGTTGATGTAGCTGGAAATGAATCCGTACAGAGTGAGATATTCACAATT
ACTACAAAAACTGAAAACGCTTCATATGAAGCGTGGGATGCAAAAAAAGCATATAAAAAGGGAGATAGAGTTCTGCACGA
AGGAAAAGTATATGAAGCAGTCCAGAGTTATCAAGGAAATGGTGATCCAAACTGGATTTATGCATTATCATTATGGAAAA
CAGTGTAA

Upstream 100 bases:

>100_bases
GCATAATTAACACATACATCGGTACAAGTTTGTCTCTTGTTATTCTTTTACATCAAAGCCCACATTCCACTACAAAGTAT
AACAAGAAGGAGACATGAAC

Downstream 100 bases:

>100_bases
GCTTTACTTAGGTATGAACTAAGAGATGATGGGCTTTGATGCAAAAGGGAATCTTGAGAATTCACTTTTCTATTAATAAA
AAAAGGTAGTGTATGAATAC

Product: putative chitinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MNNRFLKQLQNMKMNKKSLGAVALTAGIISTTLIPQNAYAHGFVEKPGSRSALCSPTYGALNVNCGSVMYEPQSLEAPKG
FPQGGPVDGQIASAGGKFGGILDQQTANRWFKNTITGGENTFTWKYTAPHLTSKWHYYITKKGWNPNKALTRADFEPIGT
VQHDGSAASNNLTHKINVPTDRSGYHVILAVWDVADTANAFYNVIDVNLINDVKPDIEAPSIPNGLQTQKVTANSVELTW
NASTDNVGVKGYQIFRNGEMIDTVLGTHFIDKKLQPSTEYSYTVKAIDAAGNVSKESAALTVKTTVETPDTEAPTQPKGL
HSMGTTASSVDLMWSPSDDNIGVDHYDIYRETEGAMKKIATSNTTSYLDKNLLANTTYKYVVKAVDVAGNESVQSEIFTI
TTKTENASYEAWDAKKAYKKGDRVLHEGKVYEAVQSYQGNGDPNWIYALSLWKTV

Sequences:

>Translated_455_residues
MNNRFLKQLQNMKMNKKSLGAVALTAGIISTTLIPQNAYAHGFVEKPGSRSALCSPTYGALNVNCGSVMYEPQSLEAPKG
FPQGGPVDGQIASAGGKFGGILDQQTANRWFKNTITGGENTFTWKYTAPHLTSKWHYYITKKGWNPNKALTRADFEPIGT
VQHDGSAASNNLTHKINVPTDRSGYHVILAVWDVADTANAFYNVIDVNLINDVKPDIEAPSIPNGLQTQKVTANSVELTW
NASTDNVGVKGYQIFRNGEMIDTVLGTHFIDKKLQPSTEYSYTVKAIDAAGNVSKESAALTVKTTVETPDTEAPTQPKGL
HSMGTTASSVDLMWSPSDDNIGVDHYDIYRETEGAMKKIATSNTTSYLDKNLLANTTYKYVVKAVDVAGNESVQSEIFTI
TTKTENASYEAWDAKKAYKKGDRVLHEGKVYEAVQSYQGNGDPNWIYALSLWKTV
>Mature_455_residues
MNNRFLKQLQNMKMNKKSLGAVALTAGIISTTLIPQNAYAHGFVEKPGSRSALCSPTYGALNVNCGSVMYEPQSLEAPKG
FPQGGPVDGQIASAGGKFGGILDQQTANRWFKNTITGGENTFTWKYTAPHLTSKWHYYITKKGWNPNKALTRADFEPIGT
VQHDGSAASNNLTHKINVPTDRSGYHVILAVWDVADTANAFYNVIDVNLINDVKPDIEAPSIPNGLQTQKVTANSVELTW
NASTDNVGVKGYQIFRNGEMIDTVLGTHFIDKKLQPSTEYSYTVKAIDAAGNVSKESAALTVKTTVETPDTEAPTQPKGL
HSMGTTASSVDLMWSPSDDNIGVDHYDIYRETEGAMKKIATSNTTSYLDKNLLANTTYKYVVKAVDVAGNESVQSEIFTI
TTKTENASYEAWDAKKAYKKGDRVLHEGKVYEAVQSYQGNGDPNWIYALSLWKTV

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 49736; Mature: 49736

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRFLKQLQNMKMNKKSLGAVALTAGIISTTLIPQNAYAHGFVEKPGSRSALCSPTYGA
CCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCE
LNVNCGSVMYEPQSLEAPKGFPQGGPVDGQIASAGGKFGGILDQQTANRWFKNTITGGEN
EEECCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCC
TFTWKYTAPHLTSKWHYYITKKGWNPNKALTRADFEPIGTVQHDGSAASNNLTHKINVPT
EEEEEEECCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCEECCCCCCCCCCEEEEECCC
DRSGYHVILAVWDVADTANAFYNVIDVNLINDVKPDIEAPSIPNGLQTQKVTANSVELTW
CCCCCEEEEEEEECHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCEEEEEE
NASTDNVGVKGYQIFRNGEMIDTVLGTHFIDKKLQPSTEYSYTVKAIDAAGNVSKESAAL
ECCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEEE
TVKTTVETPDTEAPTQPKGLHSMGTTASSVDLMWSPSDDNIGVDHYDIYRETEGAMKKIA
EEEEEECCCCCCCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
TSNTTSYLDKNLLANTTYKYVVKAVDVAGNESVQSEIFTITTKTENASYEAWDAKKAYKK
CCCCHHHHHHHHHHCCHHHEEEEEHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH
GDRVLHEGKVYEAVQSYQGNGDPNWIYALSLWKTV
CCCEECCCHHHHHHHHHCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MNNRFLKQLQNMKMNKKSLGAVALTAGIISTTLIPQNAYAHGFVEKPGSRSALCSPTYGA
CCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCE
LNVNCGSVMYEPQSLEAPKGFPQGGPVDGQIASAGGKFGGILDQQTANRWFKNTITGGEN
EEECCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCC
TFTWKYTAPHLTSKWHYYITKKGWNPNKALTRADFEPIGTVQHDGSAASNNLTHKINVPT
EEEEEEECCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCEECCCCCCCCCCEEEEECCC
DRSGYHVILAVWDVADTANAFYNVIDVNLINDVKPDIEAPSIPNGLQTQKVTANSVELTW
CCCCCEEEEEEEECHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCEEEEEE
NASTDNVGVKGYQIFRNGEMIDTVLGTHFIDKKLQPSTEYSYTVKAIDAAGNVSKESAAL
ECCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEEE
TVKTTVETPDTEAPTQPKGLHSMGTTASSVDLMWSPSDDNIGVDHYDIYRETEGAMKKIA
EEEEEECCCCCCCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
TSNTTSYLDKNLLANTTYKYVVKAVDVAGNESVQSEIFTITTKTENASYEAWDAKKAYKK
CCCCHHHHHHHHHHCCHHHEEEEEHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH
GDRVLHEGKVYEAVQSYQGNGDPNWIYALSLWKTV
CCCEECCCHHHHHHHHHCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]