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The map label for this gene is murE [H]

Identifier: 218233439

GI number: 218233439

Start: 3937277

End: 3938752

Strand: Reverse

Name: murE [H]

Synonym: BCB4264_A4015

Alternate gene names: 218233439

Gene position: 3938752-3937277 (Counterclockwise)

Preceding gene: 218231282

Following gene: 218232257

Centisome position: 72.68

GC content: 37.33

Gene sequence:

>1476_bases
ATGAAGTTGCATACACTTGTATCATGTTTGCATGATTTTCCAGTTGTTCCAAAAGAAAATCCAGAAATCACATCTATAGA
AGCTGATTCACGTAAAGTGAAAGAGGGAAGCTTATTTGTATGTATGAAAGGATATACGGTTGATAGCCATGATTTTGCTA
AGCAAGCAGCGGCACAAGGAGCGGCTGCTATTGTTGCGGAAAGACCAATTGATGTTGACGTTCCAGTTGTACTTGTGAAA
AATACTTTTCGTTCGTTAGCGGTTTTAGCTGATTATTTTTATGGTCAACCGACACACAAGTTACATTTAATCGGAATTAC
AGGTACAAATGGAAAGACAACAACATCGCATATTATGGATGAGATTATGCGAGCACATGGTCATAAAACAGGGCTAATTG
GAACGATTAATATGAAAATCGGTGATGAAACATTTGAGGTGAAAAATACAACACCAGATGCACTAACACTTCAACAGACG
TTTTCAAAAATGGTTGAACAAGGTGTGGACAGCACGGTAATGGAAGTTTCGTCACATGCGTTAGATCTTGGTCGTGTACA
CGGATGTGATTACGATGTAGCGGTGTTTACGAATTTAACACAAGATCATTTAGACTATCATAAAACGATGGAAGAATATA
AACATGCAAAAGGGTTACTATTTGCACAGCTTGGCAATAGTTATAATCATAATCGTGAAAAGTACGCTGTGCTGAATAGC
GATGATAATGTAACAGAAGAGTATATGAGAAGTACTGCAGCAACAGTTGTAACATATGGTATTGATACAACAAGTGACAT
TATGGCAAAAAATATCGTTATGACGAGTGGTGGGACTACATTTACGCTTGTCACACCATATGAAAGTGTAAATGTTACGA
TGAAATTAATAGGTAAATTTAATGTATATAACGTACTTGCAGCAACAGCAGCAGGACTTGTTTCGGGTGTGAAATTAGAA
ACAATCATTGCTGTTATAAAGGAACTAGCTGGGGTTCCAGGGCGTTTTGAAGTTGTTGATGGAGGACAAAATTATACAGT
TATTGTTGATTACGCACATACGCCGGATAGTTTAGAAAATGTATTAAAAACTGCAAAACAATTTGCAAAAGGTGATGTGT
ATTGTATCGTTGGCTGTGGCGGCGATAGGGACCGAACGAAGAGACCGATAATGGCAAGTGTTGCAACAAAATATGCAACT
CATGCAATTTATACATCAGATAATCCAAGAAGTGAAGATCCAGCGGCTATTTTAGATGATATGGTACATGGTGCAAGCGG
GAAAAATTATGAAATGATCATTGATAGAAAAGAAGCAATACACCATGCAATCGCTAAAGCGAAAGCAGATGATATCATTA
TTATTGCTGGTAAGGGGCATGAAACGTATCAAATTATTGGTAAAGAAGTTCATCATTTCGATGATCGTGAAGTTGCTAAA
GAAGCAATTACAGGGCGTTTAAACAACGAAGAGTAA

Upstream 100 bases:

>100_bases
ATTCATAAATAGGTCAGTAGCACTTACCTCCTTATATAGGAGGTAATGTGTTGCTTACTGAAAAAAAGATAAATAAACAA
TGTAGAGAGGGTTTAGTGAA

Downstream 100 bases:

>100_bases
CAACGTGAGAGGAGGACTACATGTGCTTGAGCAAGGTTTATTAGTAACGGCTGGGGTAGCATTCTTAATTTCTGTTGCCC
TTTCGCCATTGTTTATTCCA

Product: UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase

Products: NA

Alternate protein names: Meso-A2pm-adding enzyme; Meso-diaminopimelate-adding enzyme; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; UDP-MurNAc-tripeptide synthetase; UDP-N-acetylmuramyl-tripeptide synthetase [H]

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MKLHTLVSCLHDFPVVPKENPEITSIEADSRKVKEGSLFVCMKGYTVDSHDFAKQAAAQGAAAIVAERPIDVDVPVVLVK
NTFRSLAVLADYFYGQPTHKLHLIGITGTNGKTTTSHIMDEIMRAHGHKTGLIGTINMKIGDETFEVKNTTPDALTLQQT
FSKMVEQGVDSTVMEVSSHALDLGRVHGCDYDVAVFTNLTQDHLDYHKTMEEYKHAKGLLFAQLGNSYNHNREKYAVLNS
DDNVTEEYMRSTAATVVTYGIDTTSDIMAKNIVMTSGGTTFTLVTPYESVNVTMKLIGKFNVYNVLAATAAGLVSGVKLE
TIIAVIKELAGVPGRFEVVDGGQNYTVIVDYAHTPDSLENVLKTAKQFAKGDVYCIVGCGGDRDRTKRPIMASVATKYAT
HAIYTSDNPRSEDPAAILDDMVHGASGKNYEMIIDRKEAIHHAIAKAKADDIIIIAGKGHETYQIIGKEVHHFDDREVAK
EAITGRLNNEE

Sequences:

>Translated_491_residues
MKLHTLVSCLHDFPVVPKENPEITSIEADSRKVKEGSLFVCMKGYTVDSHDFAKQAAAQGAAAIVAERPIDVDVPVVLVK
NTFRSLAVLADYFYGQPTHKLHLIGITGTNGKTTTSHIMDEIMRAHGHKTGLIGTINMKIGDETFEVKNTTPDALTLQQT
FSKMVEQGVDSTVMEVSSHALDLGRVHGCDYDVAVFTNLTQDHLDYHKTMEEYKHAKGLLFAQLGNSYNHNREKYAVLNS
DDNVTEEYMRSTAATVVTYGIDTTSDIMAKNIVMTSGGTTFTLVTPYESVNVTMKLIGKFNVYNVLAATAAGLVSGVKLE
TIIAVIKELAGVPGRFEVVDGGQNYTVIVDYAHTPDSLENVLKTAKQFAKGDVYCIVGCGGDRDRTKRPIMASVATKYAT
HAIYTSDNPRSEDPAAILDDMVHGASGKNYEMIIDRKEAIHHAIAKAKADDIIIIAGKGHETYQIIGKEVHHFDDREVAK
EAITGRLNNEE
>Mature_491_residues
MKLHTLVSCLHDFPVVPKENPEITSIEADSRKVKEGSLFVCMKGYTVDSHDFAKQAAAQGAAAIVAERPIDVDVPVVLVK
NTFRSLAVLADYFYGQPTHKLHLIGITGTNGKTTTSHIMDEIMRAHGHKTGLIGTINMKIGDETFEVKNTTPDALTLQQT
FSKMVEQGVDSTVMEVSSHALDLGRVHGCDYDVAVFTNLTQDHLDYHKTMEEYKHAKGLLFAQLGNSYNHNREKYAVLNS
DDNVTEEYMRSTAATVVTYGIDTTSDIMAKNIVMTSGGTTFTLVTPYESVNVTMKLIGKFNVYNVLAATAAGLVSGVKLE
TIIAVIKELAGVPGRFEVVDGGQNYTVIVDYAHTPDSLENVLKTAKQFAKGDVYCIVGCGGDRDRTKRPIMASVATKYAT
HAIYTSDNPRSEDPAAILDDMVHGASGKNYEMIIDRKEAIHHAIAKAKADDIIIIAGKGHETYQIIGKEVHHFDDREVAK
EAITGRLNNEE

Specific function: Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan [H]

COG id: COG0769

COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MurCDEF family. MurE subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786273, Length=480, Percent_Identity=35.4166666666667, Blast_Score=271, Evalue=5e-74,
Organism=Escherichia coli, GI1786274, Length=341, Percent_Identity=29.3255131964809, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004101
- InterPro:   IPR013221
- InterPro:   IPR000713
- InterPro:   IPR005761 [H]

Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]

EC number: =6.3.2.13 [H]

Molecular weight: Translated: 53728; Mature: 53728

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHTLVSCLHDFPVVPKENPEITSIEADSRKVKEGSLFVCMKGYTVDSHDFAKQAAAQG
CCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCEECCHHHHHHHHHCC
AAAIVAERPIDVDVPVVLVKNTFRSLAVLADYFYGQPTHKLHLIGITGTNGKTTTSHIMD
CEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH
EIMRAHGHKTGLIGTINMKIGDETFEVKNTTPDALTLQQTFSKMVEQGVDSTVMEVSSHA
HHHHHCCCCCCEEEEEEEEECCCEEEECCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHH
LDLGRVHGCDYDVAVFTNLTQDHLDYHKTMEEYKHAKGLLFAQLGNSYNHNREKYAVLNS
HHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECC
DDNVTEEYMRSTAATVVTYGIDTTSDIMAKNIVMTSGGTTFTLVTPYESVNVTMKLIGKF
CCCHHHHHHHHHHHEEEEECCCCHHHHHHCEEEEECCCCEEEEECCCCCCCEEEEEEECC
NVYNVLAATAAGLVSGVKLETIIAVIKELAGVPGRFEVVDGGQNYTVIVDYAHTPDSLEN
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCHHHHH
VLKTAKQFAKGDVYCIVGCGGDRDRTKRPIMASVATKYATHAIYTSDNPRSEDPAAILDD
HHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCHHHHHHH
MVHGASGKNYEMIIDRKEAIHHAIAKAKADDIIIIAGKGHETYQIIGKEVHHFDDREVAK
HHCCCCCCCEEEEEEHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHH
EAITGRLNNEE
HHHHCCCCCCC
>Mature Secondary Structure
MKLHTLVSCLHDFPVVPKENPEITSIEADSRKVKEGSLFVCMKGYTVDSHDFAKQAAAQG
CCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCEECCHHHHHHHHHCC
AAAIVAERPIDVDVPVVLVKNTFRSLAVLADYFYGQPTHKLHLIGITGTNGKTTTSHIMD
CEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH
EIMRAHGHKTGLIGTINMKIGDETFEVKNTTPDALTLQQTFSKMVEQGVDSTVMEVSSHA
HHHHHCCCCCCEEEEEEEEECCCEEEECCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHH
LDLGRVHGCDYDVAVFTNLTQDHLDYHKTMEEYKHAKGLLFAQLGNSYNHNREKYAVLNS
HHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECC
DDNVTEEYMRSTAATVVTYGIDTTSDIMAKNIVMTSGGTTFTLVTPYESVNVTMKLIGKF
CCCHHHHHHHHHHHEEEEECCCCHHHHHHCEEEEECCCCEEEEECCCCCCCEEEEEEECC
NVYNVLAATAAGLVSGVKLETIIAVIKELAGVPGRFEVVDGGQNYTVIVDYAHTPDSLEN
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCHHHHH
VLKTAKQFAKGDVYCIVGCGGDRDRTKRPIMASVATKYATHAIYTSDNPRSEDPAAILDD
HHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCHHHHHHH
MVHGASGKNYEMIIDRKEAIHHAIAKAKADDIIIIAGKGHETYQIIGKEVHHFDDREVAK
HHCCCCCCCEEEEEEHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHH
EAITGRLNNEE
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]