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The map label for this gene is rsgA [H]

Identifier: 218232949

GI number: 218232949

Start: 3880948

End: 3881829

Strand: Reverse

Name: rsgA [H]

Synonym: BCB4264_A3960

Alternate gene names: 218232949

Gene position: 3881829-3880948 (Counterclockwise)

Preceding gene: 218236115

Following gene: 218230927

Centisome position: 71.63

GC content: 36.62

Gene sequence:

>882_bases
ATGCCAGAAGGAAAAATTATAAAAGCTTTAAGTGGGTTTTATTACGTGCAGCATGAAGAAGGGGTTACGCAATGTCGTGG
GCGAGGTGTATTTAGAAAAAATAAAATTACACCACTTGTAGGAGACCAAGTTGTTTTTCAGGCAGATAATCCAACTGAAG
GTTATGTGCTTGAAGTGTTTGATCGAAAAAATGAACTTGTTAGACCTCCTATTGCTAATGTCGATCAAGCGATCCTTGTG
TTCTCTGCAGTAGAACCAGATTTTAATCCTGGACTGTTAGATCGATTTTTAGTGCTGATTGAATATCATAACATTAAGCC
AATTATTTGTATTAGCAAGATGGATTTAGTAGATGAAAAGATGAAAGCAACTGTTGAAGCTTATGCGAATGATTATCGTG
AGATGGGTTATGATGTTTTATTTACTTCTATTAATACGTCAGAAAGTATTGATATATTAAAACCATACTTAGAAAATTGT
GTTTCTGTCGTTGCGGGCCAATCTGGTGTTGGGAAATCTTCAATGCTTAATGTGCTACGTCCAGAATTAGAGCTGAAAAC
AAATGATATTTCTTCCCATTTAGGACGCGGGAAGCATACGACAAGACACGTAGAATTAATTGCAATTGGGAGTGGACTAG
TAGCAGATACACCGGGTTTTAGTTCACTAGATTTCATTGATATAGAAGTAGAAGATCTTACATATTGTTTTCCAGAGTTG
AAAGAAGCGAGCCAATACTGTAAATTTAGAGGGTGTACACATCTTTCTGAACCGAAATGTGCGGTGAAAGCTGCGGTTGA
AGAAGGGAAGATTACAGAATATCGCTATAAGAACTATAAACAATTCGTAGAAGAAATTAGAGAGAGAAAGCCGAGGTATT
AG

Upstream 100 bases:

>100_bases
AGCGAAAGTATATATGGTAGGTTTTGAAATCGTTATTTGGAAAATTTAAATCCATTCATTTTTAAATTCAGCATCACCTT
ATACAAAAAAGGAGAATTCT

Downstream 100 bases:

>100_bases
TTATGATTAAAATTGCACCATCGATTTTATCAGCAGATTTTTCAAAATTAGGGGAAGAGATTAAAGATGTAGAAAAGGGC
GGAGCGGATTACATTCACGT

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MPEGKIIKALSGFYYVQHEEGVTQCRGRGVFRKNKITPLVGDQVVFQADNPTEGYVLEVFDRKNELVRPPIANVDQAILV
FSAVEPDFNPGLLDRFLVLIEYHNIKPIICISKMDLVDEKMKATVEAYANDYREMGYDVLFTSINTSESIDILKPYLENC
VSVVAGQSGVGKSSMLNVLRPELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFIDIEVEDLTYCFPEL
KEASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEIRERKPRY

Sequences:

>Translated_293_residues
MPEGKIIKALSGFYYVQHEEGVTQCRGRGVFRKNKITPLVGDQVVFQADNPTEGYVLEVFDRKNELVRPPIANVDQAILV
FSAVEPDFNPGLLDRFLVLIEYHNIKPIICISKMDLVDEKMKATVEAYANDYREMGYDVLFTSINTSESIDILKPYLENC
VSVVAGQSGVGKSSMLNVLRPELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFIDIEVEDLTYCFPEL
KEASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEIRERKPRY
>Mature_292_residues
PEGKIIKALSGFYYVQHEEGVTQCRGRGVFRKNKITPLVGDQVVFQADNPTEGYVLEVFDRKNELVRPPIANVDQAILVF
SAVEPDFNPGLLDRFLVLIEYHNIKPIICISKMDLVDEKMKATVEAYANDYREMGYDVLFTSINTSESIDILKPYLENCV
SVVAGQSGVGKSSMLNVLRPELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFIDIEVEDLTYCFPELK
EASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEIRERKPRY

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=307, Percent_Identity=37.1335504885993, Blast_Score=176, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 33133; Mature: 33002

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEGKIIKALSGFYYVQHEEGVTQCRGRGVFRKNKITPLVGDQVVFQADNPTEGYVLEVF
CCCCHHHHHHHCEEEEECCCCHHHHHCCCCCCCCCCCCEECCEEEEECCCCCCCEEEEEE
DRKNELVRPPIANVDQAILVFSAVEPDFNPGLLDRFLVLIEYHNIKPIICISKMDLVDEK
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHH
MKATVEAYANDYREMGYDVLFTSINTSESIDILKPYLENCVSVVAGQSGVGKSSMLNVLR
HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
PELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFIDIEVEDLTYCFPEL
CCCEEECCHHHHHHCCCCCCCEEEEEEEECCCCEECCCCCCCCEEEEEEHHHHHHHHHHH
KEASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEIRERKPRY
HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PEGKIIKALSGFYYVQHEEGVTQCRGRGVFRKNKITPLVGDQVVFQADNPTEGYVLEVF
CCCHHHHHHHCEEEEECCCCHHHHHCCCCCCCCCCCCEECCEEEEECCCCCCCEEEEEE
DRKNELVRPPIANVDQAILVFSAVEPDFNPGLLDRFLVLIEYHNIKPIICISKMDLVDEK
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHH
MKATVEAYANDYREMGYDVLFTSINTSESIDILKPYLENCVSVVAGQSGVGKSSMLNVLR
HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
PELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFIDIEVEDLTYCFPEL
CCCEEECCHHHHHHCCCCCCCEEEEEEEECCCCEECCCCCCCCEEEEEEHHHHHHHHHHH
KEASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEIRERKPRY
HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]