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The map label for this gene is 218232621

Identifier: 218232621

GI number: 218232621

Start: 914723

End: 915727

Strand: Direct

Name: 218232621

Synonym: BCB4264_A0943

Alternate gene names: NA

Gene position: 914723-915727 (Clockwise)

Preceding gene: 218231249

Following gene: 218234462

Centisome position: 16.88

GC content: 39.8

Gene sequence:

>1005_bases
ATGAAGGTTAGTAAAATATATACAACGATTGATGCACACGTAGCTGGGGAGCCGCTTCGAATTATTACGGGTGGTGTGCC
AGAAATAAAAGGAGAAACGCAGCTGGAAAGACGCGCCTACTGTATGGAACATTTGGATTATCTTCGTGAAGTTCTGATGT
ATGAACCGAGAGGGCATCACGGAATGTACGGTTGTATCATTACACCGCCAGCAAGTGCTCACGCTGATTTTGGTGTGTTA
TTTATGCACAATGAAGGCTGGAGTACGATGTGTGGTCACGGTATTATCGCTGTTATTACAGTCGGAATTGAAACAGGCAT
GTTTGAAGTAAAGGGGGAAAAACAAAAGTTCATTATTGATAGCCCAGCCGGAGAAGTTATTGCGTATGCAACATATAACG
GGAGTGAAGTAGAATCTGTATCATTTGAAAATGTTCCTTCATTTGTATACAAAAAAGACGTTCCTATTAAAATAGATAAC
TATGAATTTCAAGTAGATATTGCGTTTGGAGGAGCATTTTACGCTGTAGTAGACTGTAAAGAATTTGGTTTGAAAGTTGA
TTTTAAAGACTTGCCTGCTATTCAAACGTGGGGCGGTAAAATTAAACATTATATAGAGAGCAAAATGGAAGTGAAGCATC
CACTTGAAGAAGGTTTAAAAGGAATATACGGCGTTATTTTTTCAGATGAACCGAAAGACAAAGGTGCTACGCTACGAAAT
GTAACGATTTTTGCTGATGGGCAAGTAGATCGTTCTCCTTGCGGTACAGGAACTTCCGCAAGAATCGCAACTCTTTTTGA
AAAAGATGCTTTACAAAAGGGAGAAATTTTCGTCCATGAATGCATTACTGACGGGAAATTCGAGGGGGAAGTATTGTCGG
TAACCGCAGTAGATACATATGAAGCTGTCGTTCCAAAAGTAACGGGGAATGCCTTTATTACAGGATTTCATCAGTTCGTT
GTAGACCTGAGAGATGATTTGAATCGAGGATTTTTGTTAGGATAG

Upstream 100 bases:

>100_bases
TAGTGTATGTTTTTCTAAACAATGCATACAAATTTATACCCTATGCGTTGGCATGATATTTGCAATGAAAAGAGTATCAA
CGTATAGGGGAGAGATCGAA

Downstream 100 bases:

>100_bases
GAGGAGGGGGTGGAAAGATATGCTAGTTATAAGCGCGAATGAACAAAGAAACTTAGTAAATATGAATGAAGTTATTGAAT
ACGCGGCGCTTGCTTTAAAA

Product: putative proline racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKVSKIYTTIDAHVAGEPLRIITGGVPEIKGETQLERRAYCMEHLDYLREVLMYEPRGHHGMYGCIITPPASAHADFGVL
FMHNEGWSTMCGHGIIAVITVGIETGMFEVKGEKQKFIIDSPAGEVIAYATYNGSEVESVSFENVPSFVYKKDVPIKIDN
YEFQVDIAFGGAFYAVVDCKEFGLKVDFKDLPAIQTWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDEPKDKGATLRN
VTIFADGQVDRSPCGTGTSARIATLFEKDALQKGEIFVHECITDGKFEGEVLSVTAVDTYEAVVPKVTGNAFITGFHQFV
VDLRDDLNRGFLLG

Sequences:

>Translated_334_residues
MKVSKIYTTIDAHVAGEPLRIITGGVPEIKGETQLERRAYCMEHLDYLREVLMYEPRGHHGMYGCIITPPASAHADFGVL
FMHNEGWSTMCGHGIIAVITVGIETGMFEVKGEKQKFIIDSPAGEVIAYATYNGSEVESVSFENVPSFVYKKDVPIKIDN
YEFQVDIAFGGAFYAVVDCKEFGLKVDFKDLPAIQTWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDEPKDKGATLRN
VTIFADGQVDRSPCGTGTSARIATLFEKDALQKGEIFVHECITDGKFEGEVLSVTAVDTYEAVVPKVTGNAFITGFHQFV
VDLRDDLNRGFLLG
>Mature_334_residues
MKVSKIYTTIDAHVAGEPLRIITGGVPEIKGETQLERRAYCMEHLDYLREVLMYEPRGHHGMYGCIITPPASAHADFGVL
FMHNEGWSTMCGHGIIAVITVGIETGMFEVKGEKQKFIIDSPAGEVIAYATYNGSEVESVSFENVPSFVYKKDVPIKIDN
YEFQVDIAFGGAFYAVVDCKEFGLKVDFKDLPAIQTWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDEPKDKGATLRN
VTIFADGQVDRSPCGTGTSARIATLFEKDALQKGEIFVHECITDGKFEGEVLSVTAVDTYEAVVPKVTGNAFITGFHQFV
VDLRDDLNRGFLLG

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=338, Percent_Identity=35.5029585798817, Blast_Score=218, Evalue=6e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: NA

Molecular weight: Translated: 36898; Mature: 36898

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSKIYTTIDAHVAGEPLRIITGGVPEIKGETQLERRAYCMEHLDYLREVLMYEPRGHH
CCCCEEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCC
GMYGCIITPPASAHADFGVLFMHNEGWSTMCGHGIIAVITVGIETGMFEVKGEKQKFIID
CEEEEEECCCCCCCCCEEEEEEECCCCCCHHCCCEEEEEEEECCCCEEEECCCCEEEEEE
SPAGEVIAYATYNGSEVESVSFENVPSFVYKKDVPIKIDNYEFQVDIAFGGAFYAVVDCK
CCCCCEEEEEECCCCCEEEECCCCCCCHHEECCCCEEECCEEEEEEEEECCEEEEEEEHH
EFGLKVDFKDLPAIQTWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDEPKDKGATLRN
HHCCEECHHHCCCCHHCCHHHHHHHHHHHHHCCHHHHCCHHEEEEEECCCCCCCCCEEEE
VTIFADGQVDRSPCGTGTSARIATLFEKDALQKGEIFVHECITDGKFEGEVLSVTAVDTY
EEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCH
EAVVPKVTGNAFITGFHQFVVDLRDDLNRGFLLG
HHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKVSKIYTTIDAHVAGEPLRIITGGVPEIKGETQLERRAYCMEHLDYLREVLMYEPRGHH
CCCCEEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCC
GMYGCIITPPASAHADFGVLFMHNEGWSTMCGHGIIAVITVGIETGMFEVKGEKQKFIID
CEEEEEECCCCCCCCCEEEEEEECCCCCCHHCCCEEEEEEEECCCCEEEECCCCEEEEEE
SPAGEVIAYATYNGSEVESVSFENVPSFVYKKDVPIKIDNYEFQVDIAFGGAFYAVVDCK
CCCCCEEEEEECCCCCEEEECCCCCCCHHEECCCCEEECCEEEEEEEEECCEEEEEEEHH
EFGLKVDFKDLPAIQTWGGKIKHYIESKMEVKHPLEEGLKGIYGVIFSDEPKDKGATLRN
HHCCEECHHHCCCCHHCCHHHHHHHHHHHHHCCHHHHCCHHEEEEEECCCCCCCCCEEEE
VTIFADGQVDRSPCGTGTSARIATLFEKDALQKGEIFVHECITDGKFEGEVLSVTAVDTY
EEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCH
EAVVPKVTGNAFITGFHQFVVDLRDDLNRGFLLG
HHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]