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The map label for this gene is lstR

Identifier: 218232231

GI number: 218232231

Start: 1045852

End: 1046259

Strand: Direct

Name: lstR

Synonym: BCB4264_A1072

Alternate gene names: NA

Gene position: 1045852-1046259 (Clockwise)

Preceding gene: 218231966

Following gene: 218235664

Centisome position: 19.3

GC content: 37.5

Gene sequence:

>408_bases
ATGGAAGATCGATTAAAAGGCTTGCGAAAATCAATGGAGAACACAACGTTTAAACATTTGAGTTTTTCTGATCAACACCA
GAAGCAGGTGCGCGAAAAAATTAAGCAATCGTCCGAAAAGGAAGAAGATATCCTTTTAGCAGTGTTACAACTTCTTATGA
ATGAAAAAACAGGTTATGAATTGATGCAGTTGCTAAGAGGGAGAGGGATTCAAAAATTCGAAGGTGATGAAGGGTCTCTA
TACACTTTATTACATCGTTTAGAACGGAATCGCTTTATCCAATCTAGCTGGGATCACGCAGGAGCTAAATATTATCAATT
AAATGATAAAGGAAACAAGATGCTGCGAAAGGCAGAGAAGAATGCTACGAAGGCACGATTTATATTAAAAGGCTTAGTAC
AGGAGTGA

Upstream 100 bases:

>100_bases
AAAGAGATTGCTATGGTAATAGACGTAAAGGAAAATACGATAAAAACGAGACTGAAAAAAGCGAAGGAACTTTTGAAGGA
AGGATTGGAGGAATAATCAA

Downstream 100 bases:

>100_bases
GAAAAAATTGAACAAAAAAGGGGAGCGTTTTTTAAAAGAAGTTACGAACCATATTAAATCAAAAGAAGCGAAGGACTTAG
TAGCAGCTGAACTAAATTTT

Product: lineage-specific thermal regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator PadR Family; PadR Family Transcriptional Regulator

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MEDRLKGLRKSMENTTFKHLSFSDQHQKQVREKIKQSSEKEEDILLAVLQLLMNEKTGYELMQLLRGRGIQKFEGDEGSL
YTLLHRLERNRFIQSSWDHAGAKYYQLNDKGNKMLRKAEKNATKARFILKGLVQE

Sequences:

>Translated_135_residues
MEDRLKGLRKSMENTTFKHLSFSDQHQKQVREKIKQSSEKEEDILLAVLQLLMNEKTGYELMQLLRGRGIQKFEGDEGSL
YTLLHRLERNRFIQSSWDHAGAKYYQLNDKGNKMLRKAEKNATKARFILKGLVQE
>Mature_135_residues
MEDRLKGLRKSMENTTFKHLSFSDQHQKQVREKIKQSSEKEEDILLAVLQLLMNEKTGYELMQLLRGRGIQKFEGDEGSL
YTLLHRLERNRFIQSSWDHAGAKYYQLNDKGNKMLRKAEKNATKARFILKGLVQE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15901; Mature: 15901

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDRLKGLRKSMENTTFKHLSFSDQHQKQVREKIKQSSEKEEDILLAVLQLLMNEKTGYE
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
LMQLLRGRGIQKFEGDEGSLYTLLHRLERNRFIQSSWDHAGAKYYQLNDKGNKMLRKAEK
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHH
NATKARFILKGLVQE
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MEDRLKGLRKSMENTTFKHLSFSDQHQKQVREKIKQSSEKEEDILLAVLQLLMNEKTGYE
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
LMQLLRGRGIQKFEGDEGSLYTLLHRLERNRFIQSSWDHAGAKYYQLNDKGNKMLRKAEK
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHH
NATKARFILKGLVQE
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA