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The map label for this gene is 218231949

Identifier: 218231949

GI number: 218231949

Start: 2617312

End: 2618274

Strand: Reverse

Name: 218231949

Synonym: BCB4264_A2708

Alternate gene names: NA

Gene position: 2618274-2617312 (Counterclockwise)

Preceding gene: 218232859

Following gene: 218235279

Centisome position: 48.32

GC content: 34.99

Gene sequence:

>963_bases
ATGAAAAAGAAATATATAAATCAAATCGATACTGATGTAAGTTTTAAACCGAAAGATATTATAGGTTTAATGACTGATTA
CTTAAAAATGAAATCAAAGCTGCGTCCTATAAAGGATTTGCCTATTGTTTTATCAAATAAAAATAATGGACCGTTAGAGA
GTGTTACATGGTTTGGACATTCTGCTTCTCTTTTGAAAATAGAAGGTAAAAAACTATTATTAGACCCTATGTTTGGAGAT
GCCTCTTCCCCATTTCCTTTGTTTAATAGTAAACGCTATAGTGGTACTTTTTCTTTAGAACGTGATGACCTTCAAGAAAT
TGATGCGATTATCATTTCTCATAATCACTATGATCATTTGAATTACAAAAGTATTATGCAGTTAAAAAATCGCGCAAAAC
ACTTTTATGTTCCAACTGGAGTTGCACAATATCTTATTAAATGGGGTGTTTCACCTAGTAAAATTAGTGAGCATAATTGG
TGGGACGAAATTACGTTTGATAATATTAAGTTAGTATGTGCGCCTGCAAGGCATTTCTCTGGACGTGGTATGACAGATAG
AGATCGTTCATTATGGTGTTCATGGCTTATTCTTGGTCAAGAGACTAAAATTTTCTTTAGTGGTGATAGCGGTTATGCCC
CTCACTTTAAGGAAATTGGTGATAAATACGGTCCATTCGATCTTACATTAATGGAATGCGGGCAATATGATCCGAGGTGG
TCTGCTATTCATATGTTGCCTGAAGAAACGGTACAAGCTCATATTGATGTTAAAGGAGAATTACTTCTTCCGATTCATTG
GGGTGCTTTTACGTTAGCATTACACGAATGGAGTGACCCGATAGAACGTGTTACGAAAGAAGCTAACCGTTTAGGAGTTA
AAATTACAACGCCACAAATTGGCGAATCTATTACGTTAAAATCTACAGACTATCCTTCAACAGCTTGGTGGAGAGAAATT
TAA

Upstream 100 bases:

>100_bases
ATGTACAGCATTTAAGGTGAAAGGTAAAATGATTTCGTTTAAACTACAAATAGCTACAATAACAACATACGTATATTGTT
AAACGTAAAAAGGAGAACGA

Downstream 100 bases:

>100_bases
TTATAAATAGAAAAAGAGCGAACTCTCTTATAAGGAATTCGCTCTTTTTCTGTATTTAAACTTATTTCACAATATTGGAT
TTCCCACTATCTAAAACTCT

Product: outer membrane protein RomA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKKKYINQIDTDVSFKPKDIIGLMTDYLKMKSKLRPIKDLPIVLSNKNNGPLESVTWFGHSASLLKIEGKKLLLDPMFGD
ASSPFPLFNSKRYSGTFSLERDDLQEIDAIIISHNHYDHLNYKSIMQLKNRAKHFYVPTGVAQYLIKWGVSPSKISEHNW
WDEITFDNIKLVCAPARHFSGRGMTDRDRSLWCSWLILGQETKIFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW
SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRLGVKITTPQIGESITLKSTDYPSTAWWREI

Sequences:

>Translated_320_residues
MKKKYINQIDTDVSFKPKDIIGLMTDYLKMKSKLRPIKDLPIVLSNKNNGPLESVTWFGHSASLLKIEGKKLLLDPMFGD
ASSPFPLFNSKRYSGTFSLERDDLQEIDAIIISHNHYDHLNYKSIMQLKNRAKHFYVPTGVAQYLIKWGVSPSKISEHNW
WDEITFDNIKLVCAPARHFSGRGMTDRDRSLWCSWLILGQETKIFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW
SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRLGVKITTPQIGESITLKSTDYPSTAWWREI
>Mature_320_residues
MKKKYINQIDTDVSFKPKDIIGLMTDYLKMKSKLRPIKDLPIVLSNKNNGPLESVTWFGHSASLLKIEGKKLLLDPMFGD
ASSPFPLFNSKRYSGTFSLERDDLQEIDAIIISHNHYDHLNYKSIMQLKNRAKHFYVPTGVAQYLIKWGVSPSKISEHNW
WDEITFDNIKLVCAPARHFSGRGMTDRDRSLWCSWLILGQETKIFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW
SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRLGVKITTPQIGESITLKSTDYPSTAWWREI

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To K.pneumoniae romA [H]

Homologues:

Organism=Homo sapiens, GI170932483, Length=292, Percent_Identity=34.2465753424658, Blast_Score=178, Evalue=5e-45,
Organism=Homo sapiens, GI170932481, Length=292, Percent_Identity=34.2465753424658, Blast_Score=178, Evalue=5e-45,
Organism=Caenorhabditis elegans, GI25148824, Length=236, Percent_Identity=31.7796610169492, Blast_Score=151, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI17543100, Length=236, Percent_Identity=31.7796610169492, Blast_Score=151, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI17543104, Length=235, Percent_Identity=32.3404255319149, Blast_Score=151, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI17543102, Length=236, Percent_Identity=31.7796610169492, Blast_Score=151, Evalue=4e-37,
Organism=Saccharomyces cerevisiae, GI6325154, Length=260, Percent_Identity=30.3846153846154, Blast_Score=115, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36790; Mature: 36790

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKYINQIDTDVSFKPKDIIGLMTDYLKMKSKLRPIKDLPIVLSNKNNGPLESVTWFGH
CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEECC
SASLLKIEGKKLLLDPMFGDASSPFPLFNSKRYSGTFSLERDDLQEIDAIIISHNHYDHL
CCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHCEEEEECCCCCCC
NYKSIMQLKNRAKHFYVPTGVAQYLIKWGVSPSKISEHNWWDEITFDNIKLVCAPARHFS
CHHHHHHHHHCCCEEECCHHHHHHHHHHCCCHHHCCCCCCCCCEEECCEEEEEECCHHCC
GRGMTDRDRSLWCSWLILGQETKIFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW
CCCCCCCCHHEEEEEEEECCCEEEEEECCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCC
SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRLGVKITTPQI
EEEEECCHHHHEEEEEECCCEEEEEECCEEEEEEHHCCCHHHHHHHHHHHCEEEEECCCC
GESITLKSTDYPSTAWWREI
CCEEEEECCCCCCCHHHCCC
>Mature Secondary Structure
MKKKYINQIDTDVSFKPKDIIGLMTDYLKMKSKLRPIKDLPIVLSNKNNGPLESVTWFGH
CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEECC
SASLLKIEGKKLLLDPMFGDASSPFPLFNSKRYSGTFSLERDDLQEIDAIIISHNHYDHL
CCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHCEEEEECCCCCCC
NYKSIMQLKNRAKHFYVPTGVAQYLIKWGVSPSKISEHNWWDEITFDNIKLVCAPARHFS
CHHHHHHHHHCCCEEECCHHHHHHHHHHCCCHHHCCCCCCCCCEEECCEEEEEECCHHCC
GRGMTDRDRSLWCSWLILGQETKIFFSGDSGYAPHFKEIGDKYGPFDLTLMECGQYDPRW
CCCCCCCCHHEEEEEEEECCCEEEEEECCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCC
SAIHMLPEETVQAHIDVKGELLLPIHWGAFTLALHEWSDPIERVTKEANRLGVKITTPQI
EEEEECCHHHHEEEEEECCCEEEEEECCEEEEEEHHCCCHHHHHHHHHHHCEEEEECCCC
GESITLKSTDYPSTAWWREI
CCEEEEECCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]