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The map label for this gene is yqjC [H]

Identifier: 218231588

GI number: 218231588

Start: 1828249

End: 1828668

Strand: Direct

Name: yqjC [H]

Synonym: BCB4264_A1916

Alternate gene names: 218231588

Gene position: 1828249-1828668 (Clockwise)

Preceding gene: 218234976

Following gene: 218232431

Centisome position: 33.74

GC content: 36.9

Gene sequence:

>420_bases
ATGAAAAAAACAATTGATCATATCGGAATCGCAGTTCGTGATATAGATAGTACGATACGTTTTTATGAACAGATTCTATC
AGGAGAATTAATAGATCGTTACGTAAGTGAGACAACAGGTGTAGAAAGTGAAGTAGCCATTCTTGAAGTGGATGGAGATA
GAATTGAATTACTTGCACCGACAAATAACACCACTTCACCAATTGCCCGATTTATAAAACAAAAAGGTAAAGGTGTACAT
CACGTTGCGTATCGTGTCGATGATTTAGATGTGGCTCTAGAAGAGTTAAAAGAACAAGGTATTCGGACATTAGAGCATAC
ACTACGCATTAATAAGCACGGTAGAAGGTTAATTTATCTTAACCCAGCGGATACTGAAGGAACGATTATCGAGTATTGTG
ATTATCCGGAAGAGAAATAG

Upstream 100 bases:

>100_bases
TAAGAAAATAGGTTAAATAAAAAAAGTTATAGAACTTGTTTCTATAGCTTTTTTTGTTACTATTAATAATGAGAAAAAAT
AAAGTAGTAGGGGAAATAAA

Downstream 100 bases:

>100_bases
GAGAGGGATATTTTTTTAAAGGTGTTACGTAATAACGTAATACCTTTTTATTTATGTATTTCACATTTTCTTCACAAATG
ATTCACGATAACTTTTCTTC

Product: glyoxalase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKKTIDHIGIAVRDIDSTIRFYEQILSGELIDRYVSETTGVESEVAILEVDGDRIELLAPTNNTTSPIARFIKQKGKGVH
HVAYRVDDLDVALEELKEQGIRTLEHTLRINKHGRRLIYLNPADTEGTIIEYCDYPEEK

Sequences:

>Translated_139_residues
MKKTIDHIGIAVRDIDSTIRFYEQILSGELIDRYVSETTGVESEVAILEVDGDRIELLAPTNNTTSPIARFIKQKGKGVH
HVAYRVDDLDVALEELKEQGIRTLEHTLRINKHGRRLIYLNPADTEGTIIEYCDYPEEK
>Mature_139_residues
MKKTIDHIGIAVRDIDSTIRFYEQILSGELIDRYVSETTGVESEVAILEVDGDRIELLAPTNNTTSPIARFIKQKGKGVH
HVAYRVDDLDVALEELKEQGIRTLEHTLRINKHGRRLIYLNPADTEGTIIEYCDYPEEK

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=128, Percent_Identity=33.59375, Blast_Score=84, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17506387, Length=129, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 15850; Mature: 15850

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTIDHIGIAVRDIDSTIRFYEQILSGELIDRYVSETTGVESEVAILEVDGDRIELLAP
CCCCHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEC
TNNTTSPIARFIKQKGKGVHHVAYRVDDLDVALEELKEQGIRTLEHTLRINKHGRRLIYL
CCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
NPADTEGTIIEYCDYPEEK
CCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MKKTIDHIGIAVRDIDSTIRFYEQILSGELIDRYVSETTGVESEVAILEVDGDRIELLAP
CCCCHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEC
TNNTTSPIARFIKQKGKGVHHVAYRVDDLDVALEELKEQGIRTLEHTLRINKHGRRLIYL
CCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
NPADTEGTIIEYCDYPEEK
CCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]