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The map label for this gene is ycnJ [H]

Identifier: 218232431

GI number: 218232431

Start: 1828998

End: 1830647

Strand: Direct

Name: ycnJ [H]

Synonym: BCB4264_A1917

Alternate gene names: 218232431

Gene position: 1828998-1830647 (Clockwise)

Preceding gene: 218231588

Following gene: 218236141

Centisome position: 33.75

GC content: 34.55

Gene sequence:

>1650_bases
ATGAGTGTGAAAGTAATGAGAAGATTAGGGACATGGTTATTACTTGCATGTGTGCTTATCATATTGATACCGAAAAGTGC
ATCTGCTCATGCGTACGTTGTGAAATCAAACCCTATGGAAAATGAAACGTTGAAGAGAGCACCATCTGTTGTAAAAATTG
AATTCGATGAGGACATACAAGTTTCACGTTTTAATACATTGTACGTGAGAGATACATCAGGTAAAAGGGTCGATTTAAAA
GATGCTCATATTGATAAAAAAAATAAAAAACTATTAGAAGCCGGATTAAAAGAAAACCTCAAAAATGGTCTCTACTCTAT
TCAGTGGAAAGCTATTTCAGCTGATGGACATCCAATTCAAGGGGTTATTCCATTCCGTATTGGATTAGCGGAGGCGGAAA
CAGACGATGTACAAGTGGAAGAGATAGGGTATGTTCCGCAAATTGATATGATCATGGAACGTGGAATTTTATATACAAGT
TTCTCACTATTTATAGGAGTGCTATTCTTTAATCTTATTATGTATAAAGGGAATGCAACCTCGGTTCGATCAAGGAGTAA
GAACATAATATGGATTTCCTTATTAGGGATATTTATTAGCTTGTTATTCAATCTACCACTGCAAGCGAAAATAAATGCTG
ATGTTTCGTGGCTAGAAGCATTCAACCCTTTACTATTAAAAGAAACATTACAGCTTTCTGTTTTTGGTTATGTATGGATT
ACTCAAATGGTTCTCATTAGTACGCTTATAATTGTTACGTATTTTGCGGTGAAGCATGAGAAGTATTCGTCGTTTAAAGT
ATGGAGTATTCCAATACTATTATTTATAGGGTTACTTGTTATGAAAGCCTTTAATAGTCACGCATATGGTTTAAAGTTTA
AAGAGATTGCTGTCGTTATGGATTTTCTACATTTATTCGCAGCTTCATTATGGGTTGGTGGTTTATCATCTATTATTCTT
CTTTTACGTAAAGAGGATAACAAGTGGCATATGTATTGGGATATGATTAAGCGTTTTTCACCGTGGGCAACAGGTGCTGT
TATCGTGATTTTAATAACAGGCCTTTTTAACAGTACATTTTTTATTCCAACAATCCACTCGTTATTTGATACGAAGTATG
GATTGGCTTTATTAACAAAGATACTTTTATTCATTTTCATGGGGATATTGGGAATTATTCATTATATGAAAGGGAGAATG
CGAGCGAAGCAAGGATTAGGTGCTACGGTGAAAGTAGAGTTTATCATTGGAATTATCATTTTCGTAATCGTAGCTTTTAT
GACAAACGTACAAACACCACCGATGCCTCCTACTGGACCTTTTACAGAGAGTAAACAATTAGATAATGGATATGAAATGA
CGCTAAATGTAAGTCCTAATAGAGTAGGACAAAATATATTCCATATTACTTTAAATGATGAGAACGGACAACCCGTTACT
GATATGGAACAAATTATATTAACGACTCAATCGTTAGATATGAATATGGGAAAAGGATCATTTAAAGTTTCGGCAGTTTC
ACCGGGAGAATATGAAGCAGAAGGTATGTATATTAACATGACAGGAAACTGGAATATACAAGTACATGGATTAACGAAAT
CGCTTGATAGCTTCGATACGGATTATAAATTTATTGTAGGTGGCAGATAA

Upstream 100 bases:

>100_bases
TTATAGAAATTTATATTTAATCAGGTTAATATTTTGCCCAAGAATTAAACTTTGGAAGTTAAAGGAATGAAAATAGAGCA
ATGAGGAAGAAAGAAGTGAA

Downstream 100 bases:

>100_bases
AGTGAAACTTTAAGCAGCCCTCATCAATTGGGCTACCCGGCGAATAGCAGGATAAAGAGTAGGTATAGATAAAAAGGAGC
TAATTGAAAATGAAACGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MSVKVMRRLGTWLLLACVLIILIPKSASAHAYVVKSNPMENETLKRAPSVVKIEFDEDIQVSRFNTLYVRDTSGKRVDLK
DAHIDKKNKKLLEAGLKENLKNGLYSIQWKAISADGHPIQGVIPFRIGLAEAETDDVQVEEIGYVPQIDMIMERGILYTS
FSLFIGVLFFNLIMYKGNATSVRSRSKNIIWISLLGIFISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWI
TQMVLISTLIIVTYFAVKHEKYSSFKVWSIPILLFIGLLVMKAFNSHAYGLKFKEIAVVMDFLHLFAASLWVGGLSSIIL
LLRKEDNKWHMYWDMIKRFSPWATGAVIVILITGLFNSTFFIPTIHSLFDTKYGLALLTKILLFIFMGILGIIHYMKGRM
RAKQGLGATVKVEFIIGIIIFVIVAFMTNVQTPPMPPTGPFTESKQLDNGYEMTLNVSPNRVGQNIFHITLNDENGQPVT
DMEQIILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDTDYKFIVGGR

Sequences:

>Translated_549_residues
MSVKVMRRLGTWLLLACVLIILIPKSASAHAYVVKSNPMENETLKRAPSVVKIEFDEDIQVSRFNTLYVRDTSGKRVDLK
DAHIDKKNKKLLEAGLKENLKNGLYSIQWKAISADGHPIQGVIPFRIGLAEAETDDVQVEEIGYVPQIDMIMERGILYTS
FSLFIGVLFFNLIMYKGNATSVRSRSKNIIWISLLGIFISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWI
TQMVLISTLIIVTYFAVKHEKYSSFKVWSIPILLFIGLLVMKAFNSHAYGLKFKEIAVVMDFLHLFAASLWVGGLSSIIL
LLRKEDNKWHMYWDMIKRFSPWATGAVIVILITGLFNSTFFIPTIHSLFDTKYGLALLTKILLFIFMGILGIIHYMKGRM
RAKQGLGATVKVEFIIGIIIFVIVAFMTNVQTPPMPPTGPFTESKQLDNGYEMTLNVSPNRVGQNIFHITLNDENGQPVT
DMEQIILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDTDYKFIVGGR
>Mature_548_residues
SVKVMRRLGTWLLLACVLIILIPKSASAHAYVVKSNPMENETLKRAPSVVKIEFDEDIQVSRFNTLYVRDTSGKRVDLKD
AHIDKKNKKLLEAGLKENLKNGLYSIQWKAISADGHPIQGVIPFRIGLAEAETDDVQVEEIGYVPQIDMIMERGILYTSF
SLFIGVLFFNLIMYKGNATSVRSRSKNIIWISLLGIFISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWIT
QMVLISTLIIVTYFAVKHEKYSSFKVWSIPILLFIGLLVMKAFNSHAYGLKFKEIAVVMDFLHLFAASLWVGGLSSIILL
LRKEDNKWHMYWDMIKRFSPWATGAVIVILITGLFNSTFFIPTIHSLFDTKYGLALLTKILLFIFMGILGIIHYMKGRMR
AKQGLGATVKVEFIIGIIIFVIVAFMTNVQTPPMPPTGPFTESKQLDNGYEMTLNVSPNRVGQNIFHITLNDENGQPVTD
MEQIILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDTDYKFIVGGR

Specific function: Involved in uptake of extracellular oxidized copper under copper-limiting conditions [H]

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the CopD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR008457
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC; PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 61945; Mature: 61814

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKVMRRLGTWLLLACVLIILIPKSASAHAYVVKSNPMENETLKRAPSVVKIEFDEDIQ
CCHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCHHHHHCCCEEEEEECCCCE
VSRFNTLYVRDTSGKRVDLKDAHIDKKNKKLLEAGLKENLKNGLYSIQWKAISADGHPIQ
EEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEE
GVIPFRIGLAEAETDDVQVEEIGYVPQIDMIMERGILYTSFSLFIGVLFFNLIMYKGNAT
EEEEEEEEECCCCCCCEEHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCC
SVRSRSKNIIWISLLGIFISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWI
HHHCCCCCEEEHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHH
TQMVLISTLIIVTYFAVKHEKYSSFKVWSIPILLFIGLLVMKAFNSHAYGLKFKEIAVVM
HHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
DFLHLFAASLWVGGLSSIILLLRKEDNKWHMYWDMIKRFSPWATGAVIVILITGLFNSTF
HHHHHHHHHHHHHHHHHHEEEEEECCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHCCEE
FIPTIHSLFDTKYGLALLTKILLFIFMGILGIIHYMKGRMRAKQGLGATVKVEFIIGIII
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
FVIVAFMTNVQTPPMPPTGPFTESKQLDNGYEMTLNVSPNRVGQNIFHITLNDENGQPVT
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCHH
DMEQIILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDT
HHHHHHHHHHHCCCCCCCCCEEEEEECCCCEECCEEEEEEECCEEEEEEECHHHHHCCCC
DYKFIVGGR
CCEEEECCC
>Mature Secondary Structure 
SVKVMRRLGTWLLLACVLIILIPKSASAHAYVVKSNPMENETLKRAPSVVKIEFDEDIQ
CHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCHHHHHCCCEEEEEECCCCE
VSRFNTLYVRDTSGKRVDLKDAHIDKKNKKLLEAGLKENLKNGLYSIQWKAISADGHPIQ
EEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEE
GVIPFRIGLAEAETDDVQVEEIGYVPQIDMIMERGILYTSFSLFIGVLFFNLIMYKGNAT
EEEEEEEEECCCCCCCEEHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCC
SVRSRSKNIIWISLLGIFISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWI
HHHCCCCCEEEHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHH
TQMVLISTLIIVTYFAVKHEKYSSFKVWSIPILLFIGLLVMKAFNSHAYGLKFKEIAVVM
HHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
DFLHLFAASLWVGGLSSIILLLRKEDNKWHMYWDMIKRFSPWATGAVIVILITGLFNSTF
HHHHHHHHHHHHHHHHHHEEEEEECCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHCCEE
FIPTIHSLFDTKYGLALLTKILLFIFMGILGIIHYMKGRMRAKQGLGATVKVEFIIGIII
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
FVIVAFMTNVQTPPMPPTGPFTESKQLDNGYEMTLNVSPNRVGQNIFHITLNDENGQPVT
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCHH
DMEQIILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDT
HHHHHHHHHHHCCCCCCCCCEEEEEECCCCEECCEEEEEEECCEEEEEEECHHHHHCCCC
DYKFIVGGR
CCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]