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The map label for this gene is yrkF [H]

Identifier: 218231139

GI number: 218231139

Start: 804882

End: 805241

Strand: Direct

Name: yrkF [H]

Synonym: BCB4264_A0833

Alternate gene names: 218231139

Gene position: 804882-805241 (Clockwise)

Preceding gene: 218231893

Following gene: 218233258

Centisome position: 14.85

GC content: 34.17

Gene sequence:

>360_bases
ATGAACACAATATTAAGTACACTTTTCATTGTACTTGCTGCATGGTTTGTTATTTCACGATTTTTACCAGTGAAAGGTGT
TCAAAATATAAATGGCAAAGAATTGAAAAGTATAGTGGGGAAAAAGGGGAAGTATTTTATTGATGTCCGTACAGTAGGTG
AATATAGAGGGAATCATATGAAAGGCTTTCAAAATATCCCCCTAAATGATCTAGCAAGTAAGGCGAATCAATTAGATAAG
AATAAGGAAGTAATCGTTATTTGCCAAAGTGGAATGAGAAGTAAGCAAGCAGCAAAGGTATTGAAAAAACTAGGGTTTCA
GCAAGTAATAAACGTTTCAGGTGGTATGAATGGTTTGTGA

Upstream 100 bases:

>100_bases
ATGACATCGTAAAGCTTGAAGAAGAAGGCGATGTGCTGAAGTTTTGGATTATGAAGGCGTAGTGAAGCAATAGTTTTGTA
AATATAGAGAGGTTGGTTAT

Downstream 100 bases:

>100_bases
GGAGGAAATGTAAAATGAAAGAAATGACTACAAAAGAATTAGAAGAAAAATTGTTGCGTAAAGAAGCGGTAAATATTGTG
GATGTACGTGAAGTAGAAGA

Product: rhodanese-like domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNTILSTLFIVLAAWFVISRFLPVKGVQNINGKELKSIVGKKGKYFIDVRTVGEYRGNHMKGFQNIPLNDLASKANQLDK
NKEVIVICQSGMRSKQAAKVLKKLGFQQVINVSGGMNGL

Sequences:

>Translated_119_residues
MNTILSTLFIVLAAWFVISRFLPVKGVQNINGKELKSIVGKKGKYFIDVRTVGEYRGNHMKGFQNIPLNDLASKANQLDK
NKEVIVICQSGMRSKQAAKVLKKLGFQQVINVSGGMNGL
>Mature_119_residues
MNTILSTLFIVLAAWFVISRFLPVKGVQNINGKELKSIVGKKGKYFIDVRTVGEYRGNHMKGFQNIPLNDLASKANQLDK
NKEVIVICQSGMRSKQAAKVLKKLGFQQVINVSGGMNGL

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001455 [H]

Pfam domain/function: PF00581 Rhodanese; PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 13153; Mature: 13153

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTILSTLFIVLAAWFVISRFLPVKGVQNINGKELKSIVGKKGKYFIDVRTVGEYRGNHM
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHCCCCC
KGFQNIPLNDLASKANQLDKNKEVIVICQSGMRSKQAAKVLKKLGFQQVINVSGGMNGL
CCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCHHHHHHHCCCCCCC
>Mature Secondary Structure
MNTILSTLFIVLAAWFVISRFLPVKGVQNINGKELKSIVGKKGKYFIDVRTVGEYRGNHM
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHCCCCC
KGFQNIPLNDLASKANQLDKNKEVIVICQSGMRSKQAAKVLKKLGFQQVINVSGGMNGL
CCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]